Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g491 ATGGCTGAAGAACTTAAAGATCGTAGTTTGACGGAAACGCCTACTTGGGCTGTTGCAGTGGTCTGTTTTGTGTTGCTTGCTGTTTCGATCTTCATCGAACATATTATTCATCATATTGGATCGTGGTTAGCAAGAAGAAACAAGCGAGCCCTTTATGAAGCTCTGGAAAAGATCAAAGCAGAGCTTATGCTGTTGGGATTCATGTCCTTGCTGCTTACAGTATTACAAACTCCCATTTCAAAGATATGCATTTCTAAGAGTGTTGGATCCACTTGGTACCCTTGTGATGTTGATGAGAAAGAATTTAAAAACACATGCGGCACTGAATCAGGAAAAGTCCCATTTGTGTCTTACTATGGGATCCATCAGCTCCATATATTTATCTTTGTGCTAGCTCTCTTTCATGTGATCTACTGCGTGGCCACCTTGGCTTTGGGAACATACAAGATGAGAAGATGGAAGACTTGGGAGGATGAAACTAGGACAGCTGAATATCAATACTCTCATGATCCAGAGAGGTTTAGGTATGCAAGGGAAACATCCTTTGGGCGCAGGCATTTGAATTTCTGGAGCAGCTCTCCTGTTCTCCTATGGATTGTGTGCTTCTTTAGACAATTCTACGGATCGGTTCACAGAGATGATTATCTTGCTTTAAGACATGGATTTATCGTGGCACATTTGCCACCCGAAAGCGAAAGAAAATTTGACTTCCGGAAGTACATCCACAGATCACTTGAAGAGGACTTCAAAGCTGTAGTGGGCATCAGCCCAGTAATATGGTTCTGTGCAATATTGTTCCTACTCACCAACACACATGGGTGGTATTCTTACTTTTGGCTTCCATTCATCCCCTTAATTATACTGCTCTTGGTGGGAACAAAGCTACAAGTGATAATAACTGAATTGGGATTGAGGATTGCAGAGAGAGGTGTTGTGGTGAAGGGTACACCAATAGTTGAGCCAGGCGACCACCTCTTTTGGTTCAATCGCCCCAGCCTCATGCTCTTTCTGATCAACTTCGTTCTCTTTCTGAATGCATTTCAGCTGGCTTTCTTTGCATGGAGCACGTATGGGTTGAAATCTTGCTATCATGACACTACTGAAGATTATGTCATCAGAATCACAATGGGGGTCATGACACAGGTACTGTGCAGTTATGTGACACTCCCACTCTATGCCTTAGTGACACAGATGGGCACCACCATGAGATCGACTGTTTTTAATGACAAAGTAGCCGTGGCTCTAAGAGACTGGCACGATACGGCCAGAAAGCACACAAGACACGGGCACTCGGATGGTGTGTCCCCACAGTCAAGTAGGCCATCGACCCCATCAAATGGGATGTCCCCAGTTCATCTGTTGCAAAGCTACGACAACAACACTCCTGATATGTCTCCAGTGGCATCAAACTACGACAACGAACGGTGGTATGGAGAAGGATCAGGGTCTCTAGGGAAGAAGGATGATGATGAGCAAAGGCCAGAGAATTTTGAATCGAGAGAGCCGGGACGAGGGACTCAAGACTCAAGCTCAGCCCAATTGGCCCTGGGACCCCTCCCCATTCAAACTCAACATGAGGTCAACATCACTTCATCAGAGTTCTCATTTCGTAGGAGCCCAAGGAGCCCAAGGCCATGA 1638 45.36 MAEELKDRSLTETPTWAVAVVCFVLLAVSIFIEHIIHHIGSWLARRNKRALYEALEKIKAELMLLGFMSLLLTVLQTPISKICISKSVGSTWYPCDVDEKEFKNTCGTESGKVPFVSYYGIHQLHIFIFVLALFHVIYCVATLALGTYKMRRWKTWEDETRTAEYQYSHDPERFRYARETSFGRRHLNFWSSSPVLLWIVCFFRQFYGSVHRDDYLALRHGFIVAHLPPESERKFDFRKYIHRSLEEDFKAVVGISPVIWFCAILFLLTNTHGWYSYFWLPFIPLIILLLVGTKLQVIITELGLRIAERGVVVKGTPIVEPGDHLFWFNRPSLMLFLINFVLFLNAFQLAFFAWSTYGLKSCYHDTTEDYVIRITMGVMTQVLCSYVTLPLYALVTQMGTTMRSTVFNDKVAVALRDWHDTARKHTRHGHSDGVSPQSSRPSTPSNGMSPVHLLQSYDNNTPDMSPVASNYDNERWYGEGSGSLGKKDDDEQRPENFESREPGRGTQDSSSAQLALGPLPIQTQHEVNITSSEFSFRRSPRSPRP* 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5356550 5360892 + Vvi13g491 Vvi13g491 774277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g491 545 MobiDBLite consensus disorder prediction 503 538 - -
Vvi13g491 545 Pfam Mlo family 103 457 IPR004326 GO:0006952|GO:0016021
Vvi13g491 545 Pfam Mlo family 8 101 IPR004326 GO:0006952|GO:0016021
Vvi13g491 545 MobiDBLite consensus disorder prediction 422 545 - -
Vvi13g491 545 PANTHER MLO-LIKE PROTEIN 109 537 - -
Vvi13g491 545 PANTHER MLO-LIKE PROTEIN 1 109 - -
Vvi13g491 545 MobiDBLite consensus disorder prediction 432 468 - -
Vvi13g491 545 MobiDBLite consensus disorder prediction 481 502 - -
Vvi13g491 545 PANTHER MLO-LIKE PROTEIN 1 109 537 IPR004326 GO:0006952|GO:0016021
Vvi13g491 545 PANTHER MLO-LIKE PROTEIN 1 1 109 IPR004326 GO:0006952|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g592 Vvi13g491 ECH
Vvi6g290 Vvi13g491 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g491 K08472 - vvi:100233059 1045.03