Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g499 ATGAAATTCCCACTTGCATGCTCAGAGTGCTTCTATCCTTCTTCTGACGACCTCCATGACAACAACGGAGGACGAGTCATAAAATCAGGTCTACCGACACTCCAAAACGCTCACGCTTTCACATACAATGAAATCAAAATTGCCACCGGTGGCTTCCGCTCATCAGATAAGATCGGCCAAGGGGGATTCGGATCTGTTTATAAGGGAAGACTTCAAGATGGAACAGTGGTGGCAGTGAAGGTTCTTTCAGCAGAATCAAAGCAAGGGGACAGGGAGTTTATGTCTGAGATGGCTTCAATATCTAATATCAACCATGAAAATCTTGTCAAGCTGCATGGTGGTTGCGTCCATGGAGCCCGTAGAATGCTCGTTTACGACTATATGCAGAACAATAGCCTTTCTCATACCTTACTCCGTGGGGAGAAAAGAAGAGCTAAATTTAGCTGGAAAACGAGAAGGGAAATTTGCTTGGGGATTGCTCGAGGGCTTGCTTATATCCACGAGGACATTACACCCCACGTAGTTCACCGGGACATTAAAGCTAGCAATATACTTCTTGATGGAGATTTTACCCCAAAAATTTCAGATTTTGGCCTCTCCAAACTCTTTTATACCAACATCACTCACATTACCACACGGGTTGCCGGGACATTAGGCTATCTTGCTCCGGAATATGCCTTAAGTGGGCATTTGACCAGAAAATCTGATGTATATAGCTTTGGAGTGCTGATTTTAGAGATTGTGAGCGGAAGAACCGCTATCGACTTTGACTTGGACCTGGGAGAGCATTACCTCGTCCAGAAGGTAACACCAACAACCCATAACCCACAACCCCACTCTCATGCAATACATCTACAGAGAAAATGA 867 44.87 MKFPLACSECFYPSSDDLHDNNGGRVIKSGLPTLQNAHAFTYNEIKIATGGFRSSDKIGQGGFGSVYKGRLQDGTVVAVKVLSAESKQGDREFMSEMASISNINHENLVKLHGGCVHGARRMLVYDYMQNNSLSHTLLRGEKRRAKFSWKTRREICLGIARGLAYIHEDITPHVVHRDIKASNILLDGDFTPKISDFGLSKLFYTNITHITTRVAGTLGYLAPEYALSGHLTRKSDVYSFGVLILEIVSGRTAIDFDLDLGEHYLVQKVTPTTHNPQPHSHAIHLQRK* 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5456051 5458524 - Vvi13g499 Vvi13g499 774285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g499 288 PANTHER RECEPTOR-LIKE KINASE 8 265 - -
Vvi13g499 288 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Vvi13g499 288 Gene3D Phosphorylase Kinase; domain 1 27 127 - -
Vvi13g499 288 ProSiteProfiles Protein kinase domain profile. 52 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi13g499 288 SUPERFAMILY Protein kinase-like (PK-like) 33 271 IPR011009 -
Vvi13g499 288 Pfam Protein kinase domain 53 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi13g499 288 Gene3D Transferase(Phosphotransferase) domain 1 128 285 - -
Vvi13g499 288 SMART serkin_6 52 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi13g499 288 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 265 - -
Vvi13g499 288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Vvi13g499 288 Coils Coil 283 288 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g574 Vvi13g499 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76167 PF00069 Pkinase 1.10E-46 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g499 - - vvi:100253059 543.117