Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g506 ATGGAAGCCAACAGAGGCCAGAATGGAATTCAACAATTGCTAGCTGTAGAACAAGAAGCTCAGCATATTGTCAATGCTGCCAGAAATGCAAAAATGGCTAGACTTAAACAGGCCAAAGAAGAGGCTGAGAAGGAGATTGCTGAATTCCGTGTTCGAATGGAAAAAGAATTTCAAAGAAAGGTTGCAGAGAGTAGTGGGGACTCTGGTGCTAATGTGAAACGCCTTGAGCTGGAAACGGATGCAAAGATCCAGAACCTGAAGGTGGAGGCTGCAAGAATTTCCCATGATGTTGTCCACATGCTTCTGAAGCATGTGAATACTGTGAGGACCTAA 333 44.44 MEANRGQNGIQQLLAVEQEAQHIVNAARNAKMARLKQAKEEAEKEIAEFRVRMEKEFQRKVAESSGDSGANVKRLELETDAKIQNLKVEAARISHDVVHMLLKHVNTVRT* 111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5554338 5557189 - Vvi13g506 Vvi13g506 774292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g506 110 Pfam Vacuolar (H+)-ATPase G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vvi13g506 110 Gene3D - 2 110 - -
Vvi13g506 110 Coils Coil 25 59 - -
Vvi13g506 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 109 - -
Vvi13g506 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vvi13g506 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g572 Vvi13g506 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g506 K02152 - vvi:100251261 196.823