Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g564 ATGGTGTTTGCAGCAATTCTTGTCATGTTTGCGGCTGCTTCAGCGACTTCCATGTTCGGCCTCTACTCAAGCGCAATCAAAGCCGCTCTGGGATATGATCAAACTACCCTCAATTTGCTCGGCTTTTTCAAGGACTTGGGAGCAAATGTTGGGGTTCTTTCTGGCCTCATCAATGAGGTCACACCACCATGGGTTGTGCTATCAATGGGTGCGGCTATGAATCTTTTCGGCTACTTAATGATATGGCTTGCAGTGTCGGGAAAAATGGCCAAACCCCGGGTCTGGCACATGTGTCTCTACATATGCATTGGCTCGAATTCTCAGGCTTTTGCCACCACTGGAGCACTTGTCACCTGCGTGAAGAACTTCCCTGAGAACCGAGGTGCGGTTTTGGGGATATTGAAGGGGTATCAGGGGGCACTAACTGGTGCAATTATCACACAGATGTACCATGCTTTCTATCGCAATGATGCAACGGCTCTCATTTTGTTTGTAGCTTGGCTTCCTGCAGCTGTATCTTTGGGGTTTCTTCCTGCTATTCGAATCATGAAGGTGGATCAGCGGAGAAATGAGCTCAAGGTCTTTTATAATTTCCTTTATATCTCTCTTGGCCTCGCAGGATTTCTCATGATTATAATTATAGTAGAGAAACAGATGAAGTTCACTCAGAGTGAATATGGTGGAAGCGTGGCTGTTGTCCTTTTCTTGCTCTTTCTTCCACTTGCTCTTGTTATAAAAGAAGAATTCGATCTTTGGAAGACGAAGAAACAAGCCCTGAATGAGCCTTCCCAGTTGAATATCATCACAGAGAGTTCACGCAACCAGTTACCCAGTCCACAGAAGCAAAATTCTTGTCTATCAAATGTTTTCCGACCACCCAAGAGAGGGGAGGACTACACCATACTTCAAGCCCTTTTCAGCTTCGACATGTTTCTTCTATTCTTAGCTACGATTTGTGGTGTTGGAGGGACTTTAACAGCAATAGACAACTTGGGACAGATTGGAACTTCACTGGGGTACCCGACTGACAGCCTAAGCACTTTCATATCGCTTATGAGCATATGGAACTATCTCGGAAGAGTGGTTGCTGGTTTCGTATCCGAAATCTTCTTAACCAAATACAAATTTCCTCGGCCTCTAATGCTGGCGCTCGTCCAACTCTTGGCATGCGCTGGTCATCTGCTCATGGCCTTCAACGTCCACAATGCTCTCTACTTAGCATGGATGATCATCGGGTTTTGCTTTGGTGCCCAATGGCCATTACTTTTCGCCATCATTTCTGAAATTTTTGGGCTCAAATATTACTCCACGTTGTACAATTTTGGCTCTGTGGCTAGCCCAATTGGTTCTTATCTGCTGAACGTGAGGGTGGCCGGATATCTATATGATAAAGAAGCAGAAAGGCAAATGGCAGCCACGGGGAGCCATAGGAAGCGTGGTGAGGAGCTGACTTGCATCGGGGCAGAGTGCTTCAAATTGGCTTTCCTCATAATAGCAGGGGTTACATTTTTTGGTACCCTTGCGTCGTTCATTCTTGTGCTTAGGACTCGCAAGTTCTACCGGAAGGAAATGGTGGGTGAGGGTGGAGGCTGGGCTAATGACATGAGGAGCCTAACCCTGCAAATCCTGACAGGGCGGTGGTTCATGGTGTTTGCCACATTTCTCATCTTGTCCGCTTCTGGTGCAACCTACATGTTCGGCCTCTACTCCAGCACAATCAAATCAACTCTGGGCTATGATCAAACCACCCTCAATTTGATCAGCTTTTGCAAGGACTTGGGAGCCAACGTTGGAGTCCTTGCAGGCCTCATCAACGAGGTCACTCCAACATGGGTTGTGCTATCAATGGGTGCAGCCCTCAATTTTTTCGGCTACTTCATGATATGGCTTGCAGTGTCTGGAAAAATACTCAAACCCCATGTCTGGCACATGTGCCTCTACATATGTATCGGTGCCAATTCAGTCTTTCTCCAACACCGGAGCCCTGGTCACCTGCATTTCTCGGTTGCCCCCACCATCGCTGCCCGAGTCCACAGCTGCAGAAAGCTCACAGAAGCAAGTTTCTTGCCTATCAAACGTGTTCCACCCACCGGAGAGAGAGGGAGATTACACCATACCTCAAGCCCTTTTCAGCATCGACTTGTTGATTCTGGTCTTAGCTTCAATCTGCGGTCTGGGAGGGAGTTTAACAGTAGTAGACAACTTGGGACAGATCGGAACTTCTCTGGGGTACCCCACTCGAAGCCTAAGCACCTTCATATCACTCCTCAGCATATGGAACTATCTAGGAAGAGTAGCTGCTGGTTCCATATCAGAAACCCTCCTGACCAAGTACAAATTCCCTCGGCCTTTGATGCTCACTCTCATCGTACTCCTCTCATGTGTTGGCCATCTCCTCATCGCCTTCAACATCAAGAACTCTCTCTATGTAGCTTCCGTAATCATCGGCTTCTGTTTTGGGTGGCAGGACATCTATATGATAAAGAGGCGAAAAGGCAAATGGCAGCTCTGGGGATCCAGAGGAAGCCTGGTGAGGAATTGAACTGCAGTGGTGTGGAGTGCTTCAAATTGGCTTTCATTATAATCACAGGGGTCACCATTTTTGGTTCTCTGGTTTCATTCATGCTAGTGATTAGGACTAGGAGGTTTTACCAGACTGACATTTACAAGAAGTTCCGGGAGGAGGCCAAAGCCGATGAGGCCAAGACGGTGACAGTCACTAATGGTTAG 2730 47.44 MVFAAILVMFAAASATSMFGLYSSAIKAALGYDQTTLNLLGFFKDLGANVGVLSGLINEVTPPWVVLSMGAAMNLFGYLMIWLAVSGKMAKPRVWHMCLYICIGSNSQAFATTGALVTCVKNFPENRGAVLGILKGYQGALTGAIITQMYHAFYRNDATALILFVAWLPAAVSLGFLPAIRIMKVDQRRNELKVFYNFLYISLGLAGFLMIIIIVEKQMKFTQSEYGGSVAVVLFLLFLPLALVIKEEFDLWKTKKQALNEPSQLNIITESSRNQLPSPQKQNSCLSNVFRPPKRGEDYTILQALFSFDMFLLFLATICGVGGTLTAIDNLGQIGTSLGYPTDSLSTFISLMSIWNYLGRVVAGFVSEIFLTKYKFPRPLMLALVQLLACAGHLLMAFNVHNALYLAWMIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVAGYLYDKEAERQMAATGSHRKRGEELTCIGAECFKLAFLIIAGVTFFGTLASFILVLRTRKFYRKEMVGEGGGWANDMRSLTLQILTGRWFMVFATFLILSASGATYMFGLYSSTIKSTLGYDQTTLNLISFCKDLGANVGVLAGLINEVTPTWVVLSMGAALNFFGYFMIWLAVSGKILKPHVWHMCLYICIGANSVFLQHRSPGHLHFSVAPTIAARVHSCRKLTEASFLPIKRVPPTGERGRLHHTSSPFQHRLVDSGLSFNLRSGREFNSSRQLGTDRNFSGVPHSKPKHLHITPQHMELSRKSSCWFHIRNPPDQVQIPSAFDAHSHRTPLMCWPSPHRLQHQELSLCSFRNHRLLFWVAGHLYDKEAKRQMAALGIQRKPGEELNCSGVECFKLAFIIITGVTIFGSLVSFMLVIRTRRFYQTDIYKKFREEAKADEAKTVTVTNG* 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6684545 6691346 - Vvi13g564 Vvi13g564 774350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g564 909 Gene3D MFS general substrate transporter like domains 305 520 IPR036259 -
Vvi13g564 909 SUPERFAMILY MFS general substrate transporter 2 519 IPR036259 -
Vvi13g564 909 CDD MFS_Mch1p_like 2 506 - -
Vvi13g564 909 Pfam Nodulin-like 1 244 IPR010658 -
Vvi13g564 909 Pfam Nodulin-like 546 654 IPR010658 -
Vvi13g564 909 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 820 905 - -
Vvi13g564 909 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 530 655 - -
Vvi13g564 909 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 523 - -
Vvi13g564 909 PANTHER MFS TRANSPORTER 1 523 - -
Vvi13g564 909 PANTHER MFS TRANSPORTER 530 655 - -
Vvi13g564 909 PANTHER MFS TRANSPORTER 820 905 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g564 - - vvi:100256418 1007.28