Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g566 ATGGTGGTTGCCGGAAATGCTGCCGGAGGGGGTGGTTGGGCTGACACGAGGAGCCTATCCGTCCATGTCATCACCGGTCGGTGGTTCATGGTGTTTGCATCATTTCTGATCATGTCGGCCGCCGGTGCAACCTACATGTTCGGTCTCTACTCAAGCACACTCAAATCCGTTCTGGGATATGATCAAACCACCCTGAATTTGCTCAGCTTTTTCAAGGACTTGGGAGCAAACGTTGGGGTCCTTTCAGGCCTCATCAACGAGGTCACACCCCCATGGGTTGTGCTATCAATAGGAGCAGCAATGAATTTTTTTGGCTACTTCATGATATGGCTTGCCGTCTCTCACAAAATAGCCAAGCCCCAGGTGTGGCACATGTGTCTCTACATATGCATCGGTGCAAATTCCCAGGCTTTCGCTAACACCGGATCTCTGGTGACCTGCGTTAAGAACTTCCCGGAGAGCCGAGGCGTGGTGTTGGGGATACTGAAGGGGTATGTTGGGCTGAGTGGTGCAATCATCACACAGCTCTACCATGCCTTCTATGGCAATGATACCAAGGCTCTTATTTTGCTCATAGGTTGGCTGCCTGCTGCTATATCTTTTGCATTTCTTCGGACCATTCGAATCATGAAGGTGATTCGACAGGAGAGCGAGCGCAAAGTTTTCTACAAGTTTCTTTACATCTCTCTTGGCCTCGCCGGGTTTCTCATGATTATAATTATAGTTGAGAAACAGATGACTTTTTCTCAGAGTGGGTACTGGGGAAGCGCCGCTTTAGTTCTTCTCTTGCTCTTTCTCCCGCTCGCTCCTCCACTGTTGAAAATCATCGCCGGGAATTTGAACACTGAGGCTTCTTCATCTTCACTACCGCCTGAATCAGCAGCTGCAACAAGTTCTCTCCCCGAACAACTAAGCTCACAGAAGGAAGTTTCTTGCTTCTCCAACGTGTTCAGGCCACCGGACAGAGGAGAGGACTACACCATACTTCAAGCCCTTTTCAGCATAGACATGTTTATTGGGAGTTCACTGGGGTACCCCCATAAAAGCCTGAACACTTTCATATCGCTGGTTAGCATATGGAACTATCTTGGAAGAGTGACTGCAGGCTTTGGATCGGAGATCGTCTTAGACAAGTACAAATTCCCCCGCCCTTTGATGCTCACACTCATCCTCCTCCTCTCATGTGTTGGTCATCTCCTCATCGCCTTCAACATCAAGAATGGTCTCTACTTTGCATCAATAATTATCGGGTTTTGCTTCGGTGCTCAATGGCCAATACTTTACGCAGTCATATCTGAAATTTTTGGCCTCAAATACTACTCCACGTTGTACAATTTTGGCGCAGTGGCTAGCCCAATCGGTTCCTATTTATTCAATGTGATGGTGGCCGGATATCTCTATGATAAAGAGGGAAAAAGACAAATGGCAGCCCTGGGGATTGAAAGAAAGCCTGGTGAGGACTTGGACTGCACAGGCGTAGAGTGCTTCAAATTGTCCTTCATTATAATCACAGCGGCCACACTTTTCGGTTCACTTGTATCGCTCATACTAGTGCTTCGGACCAGAAAGTTCTACAAGGGTGACATTTACAAGAAGTTCCGGGAACAAGCCAAAGCAGCCGAGACTGAGATGGCCCAGGCCGAGAATCGGGCTGCCCCATCGCTGGCAAAAGTGTCGGCTGCTTTGATTCTTCCCGGAACTTCTTGTAAATGTTCCCTTGTTGAACTTTCTAGTCCGAATCACTAG 1746 48.28 MVVAGNAAGGGGWADTRSLSVHVITGRWFMVFASFLIMSAAGATYMFGLYSSTLKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAAMNFFGYFMIWLAVSHKIAKPQVWHMCLYICIGANSQAFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYHAFYGNDTKALILLIGWLPAAISFAFLRTIRIMKVIRQESERKVFYKFLYISLGLAGFLMIIIIVEKQMTFSQSGYWGSAALVLLLLFLPLAPPLLKIIAGNLNTEASSSSLPPESAAATSSLPEQLSSQKEVSCFSNVFRPPDRGEDYTILQALFSIDMFIGSSLGYPHKSLNTFISLVSIWNYLGRVTAGFGSEIVLDKYKFPRPLMLTLILLLSCVGHLLIAFNIKNGLYFASIIIGFCFGAQWPILYAVISEIFGLKYYSTLYNFGAVASPIGSYLFNVMVAGYLYDKEGKRQMAALGIERKPGEDLDCTGVECFKLSFIIITAATLFGSLVSLILVLRTRKFYKGDIYKKFREQAKAAETEMAQAENRAAPSLAKVSAALILPGTSCKCSLVELSSPNH* 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6787890 6812746 + Vvi13g566 Vvi13g566 774352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g566 581 SUPERFAMILY MFS general substrate transporter 28 276 IPR036259 -
Vvi13g566 581 Coils Coil 530 550 - -
Vvi13g566 581 Pfam Nodulin-like 27 270 IPR010658 -
Vvi13g566 581 SUPERFAMILY MFS general substrate transporter 338 528 IPR036259 -
Vvi13g566 581 Gene3D MFS general substrate transporter like domains 326 525 IPR036259 -
Vvi13g566 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 555 - -
Vvi13g566 581 CDD MFS_Mch1p_like 26 510 - -
Vvi13g566 581 PANTHER MFS TRANSPORTER 9 555 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g1129 Vvi13g566 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g566 - - vvi:100246181 1035.79