Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g567 ATGGTGGTTGCCGGAATTGCTGCCGGAGGGGGTGGTTGGGCTGACATGAAGAGCCTATCAGTCCAAGTCATCACCGGTCGGTGGTTCGTGGTGTTTGCATCATTTCTGATCATGTCGGCCGCCGGTGCAACCTACATGTTCGGTCTCTACTCAGGCACAATCAAATCCGCTCTGGGATATGATCAAACCACCCTGAATTTGCTCAGCTTTTTCAAGGACTTGGGAGCAAACGTTGGGGTCCTTTCAGGCCTCATCAACGAGGTCACGCCCCCATGGGTTGTGCTATCAATGGGAGCAGCCCTGAATTTTTTTGGCTACTTCATGATATGGCTTGCCGTCTCTCAGAAAATAGCCAAGCCCCAGGTGTGGCACATGTGTCTCTACATATGCATCGGTGCAAATTCCCAGGCTTTCGCTAACACCGGATCTCTGGTGACCTGCGTTAAGAACTTCCCGGAGAGCCGAGGCGTGGTGTTGGGGATACTGAAGGGGTATGTTGGGCTGAGTGGTGCAATCATCACACAGCTCTACCATGCCTTCTATGGCAATGACACCAAGGCTCTTATTTTGCTCATAGCTTGGCTGCCTGCTGCTATATCTTTTGCATTTCTTCGGACCATTCGAATCATGAAGGTGATTCGACAGGAGAACGAGCTCAAAGTTTTCTACAATTTTCTTTACATCTCTCTTGGCCTCGCTGGGTTTCTCATGATTATAATTATAGTAGAGAAAGAGCTGACTTTTTCTCAGAGTGAGTACGGGGGGAGCGCCGCTCTAGTTCTTCTCTTGCTCTTTCTCCCGCTCGCTGTTGTTATACAAGAGGAATTCAAGCTGTGGAAGATCAAGCAAGAGGCCCTGCTTTCTTGCTTCTCCAACGTGTTCAGGCCACCGGACAGAGGAGAGGACTACACCATACTTCAAGCCCTTTTCAGCATAGACATGCTTATTCTATTCTTCACTACAATTTGTGGTGTTGGAGGGACTTTAACAGCCATAGACAACTTGGGACAGATTGGGAGTTCACTGGGGTACCCCCAGAAAAGCCTGAGCACTTTCATATCGCTGGTTAGCATATGGAACTATCTTGGAAGAGTAACTGCAGGCTTTGGATCGGAGATCGTCTTAGACAAGTACAAATTCCCCCGCCCTTTGATGCTCACACTCATCCTCCTCCTCTCATGTGTTGGCCATCTCCTCATCGCCTTCAACATCAAGAATGGTCTCTACTTTGCATCAATAATTATCGGGTTTTGCTTCGGTGCTCAATGGCCATTACTTTTCGCAGTCATATCTGAAATTTTTGGCCTCAAATACTACTCCACGTTGTACAATTTTGGCTCAGTGGCTAGCCCAATCGGTTCCTATTTACTCAATGTGAGGCGTGGTGAGGACTTGGACTGCACAGGAGTAGAGTGCTTCAAATTGTCTTTCATTATAATCACAGCGGCCACACTTTTCGGTTCACTTGTATCGCTCATACTAGTGCTTCGGACCAGAAAGTTCTACAAGGCAGCAATTATGGTTAAGTTAAAAAGACTCAGAAAAAATAGAATGACAGTAGAGGAAGATAAGACAAAAAGAAGAGATACAGGACCCGGGACCTTGGATTGTAATGTTTCATACCCTCCCCCGTCAGATACAATCTTACAGATGCTTTTATTTTGTATTTTATATGTCATTGAATTTGGAGAAGATGAAATTTGA 1704 46.42 MVVAGIAAGGGGWADMKSLSVQVITGRWFVVFASFLIMSAAGATYMFGLYSGTIKSALGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSMGAALNFFGYFMIWLAVSQKIAKPQVWHMCLYICIGANSQAFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYHAFYGNDTKALILLIAWLPAAISFAFLRTIRIMKVIRQENELKVFYNFLYISLGLAGFLMIIIIVEKELTFSQSEYGGSAALVLLLLFLPLAVVIQEEFKLWKIKQEALLSCFSNVFRPPDRGEDYTILQALFSIDMLILFFTTICGVGGTLTAIDNLGQIGSSLGYPQKSLSTFISLVSIWNYLGRVTAGFGSEIVLDKYKFPRPLMLTLILLLSCVGHLLIAFNIKNGLYFASIIIGFCFGAQWPLLFAVISEIFGLKYYSTLYNFGSVASPIGSYLLNVRRGEDLDCTGVECFKLSFIIITAATLFGSLVSLILVLRTRKFYKAAIMVKLKRLRKNRMTVEEDKTKRRDTGPGTLDCNVSYPPPSDTILQMLLFCILYVIEFGEDEI* 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6815812 6817818 + Vvi13g567 Vvi13g567 774353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g567 567 Pfam Nodulin-like 27 272 IPR010658 -
Vvi13g567 567 CDD MFS_Mch1p_like 26 487 - -
Vvi13g567 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 461 524 - -
Vvi13g567 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 280 - -
Vvi13g567 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 283 460 - -
Vvi13g567 567 Gene3D MFS general substrate transporter like domains 309 503 IPR036259 -
Vvi13g567 567 PANTHER MFS TRANSPORTER 461 524 - -
Vvi13g567 567 PANTHER MFS TRANSPORTER 9 280 - -
Vvi13g567 567 PANTHER MFS TRANSPORTER 283 460 - -
Vvi13g567 567 SUPERFAMILY MFS general substrate transporter 27 500 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g1129 Vvi13g567 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g567 - - vvi:100266758 924.465