Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g624 ATGGCTCCTGCTTTTGCTGCTGCTTCTTCGACTTATTCTCCTTACTACCACATCTTCTTCACTGCTTTAGCCTTCCTCATATCAGGTCTGATCGTCTTGCTGTCACGTAAAACCAAGTCAAAGAAGCTAAACCTTCCTCCGGGACCCCCTGGTTGGCCTATTGTTGGAAACCTCTTCCAATTTGCTCGCTCTGGGAAGCAATTTTTTCAGTATGTGAGAGAGCTTAGGCCAAAATATGGCCCAATTTTCACTTTGAAGATGGGGAATAGAACCATGATCATAATAAGCAGTGCAGAATTGGCGCACGAAGCTCTCATCGAAAAGGGCCAGTCTTTCGCTAGCAGGCCTCGAGAAAACCCTACGCGCACCGTGTTCAGCTGCAACAAGTTCACGGTGAACGCTGCCGTCTACGGCCCTGTCTGGCGGTCGCTGCGGAGGAACATGGTGCAAAACATGCTCAGTGCAAGCAAGATTAGGGAGTTCAGCAATTTGAGAGATGTGTCCATGGATAAGCTCATTGACAGGCTACGGAGCGAGGCTGAGGCTAATGATGGAGCTGTTTGGGTTCTGAAGAATGCTCGATTTGCTGTTTTTTGCATCCTTTTGTCTATGTGTTTTGGAGTCGAAATGGATGAGGAGACCATTGAGGTGATGGATGATCTGATGAAAACTGTTCTAATCACTCTTGATCCAAGACTTGATGACTATCTCCCACTTCTAAGCCCATTCTTCTCAAAGCAGAGGAAAGCCGCCACGGAAGTGCGGAAGAGGCAGATCAAAACTGTTGTCCCCTTCATCGAGAGGCGGCGTGCGGCGCTTGAAAACCCAGGATCAGATAAAACCGCGGCTTCATTTTCCTACCTCGACACGATCTTCGATCTCAAAATCGAGGGGCGTAAATCATCTCCAACCAACCCCGAGCTCGTCACACTCTGCTCCGAGTTCCTCAATGGCGGCACCGACACAACAGGGACGGCGGTCGAGTGGGCAATTGCCCGAATGATCGAGAACCCCGAGATTCAGTCAAAACTATACGAAGAGATCAAAACAACAGTGGGTGATCGTAAGGTTCAAGAGAAAGACATGGAGAAGATGCCTTACCTAAACGCAGTTTCAAAAGAACTACTACGTAAACACCCTCCCACCTACTTTTCCCTAACTCATGCAGTCACAGAGCCAGCGAAGTTGGCAGGCTACGACATACCCACAGACGCAAATGTCGAGTTCTTCTTGCCACCCATCTCCGAGGACCCCAAGCTATGGAAGAATCCCGAAAAGTTCGACCCCGACCGCTTTTTCTTGGGCGGTGAAGACGCCGATATAACCGGAGTGACCGGCGTAAAAATGATGCCATTCGGAGTAGGGCGAAGGATATGCCCTGGTTTGAGCATGGCCACCGTGCATGTGAACCTAATGCTGGCAAGGATGGTGCAGGACTTCGAGTGGAGCGCATACCCTGAAAACAGTAAGATTGATTTTAGTGAAAAGTTGGAATTCACAGTGGTGATGAAGAACCCTCTAAGGGCCAAGATTAAGCCTAGGGTATGA 1548 49.22 MAPAFAAASSTYSPYYHIFFTALAFLISGLIVLLSRKTKSKKLNLPPGPPGWPIVGNLFQFARSGKQFFQYVRELRPKYGPIFTLKMGNRTMIIISSAELAHEALIEKGQSFASRPRENPTRTVFSCNKFTVNAAVYGPVWRSLRRNMVQNMLSASKIREFSNLRDVSMDKLIDRLRSEAEANDGAVWVLKNARFAVFCILLSMCFGVEMDEETIEVMDDLMKTVLITLDPRLDDYLPLLSPFFSKQRKAATEVRKRQIKTVVPFIERRRAALENPGSDKTAASFSYLDTIFDLKIEGRKSSPTNPELVTLCSEFLNGGTDTTGTAVEWAIARMIENPEIQSKLYEEIKTTVGDRKVQEKDMEKMPYLNAVSKELLRKHPPTYFSLTHAVTEPAKLAGYDIPTDANVEFFLPPISEDPKLWKNPEKFDPDRFFLGGEDADITGVTGVKMMPFGVGRRICPGLSMATVHVNLMLARMVQDFEWSAYPENSKIDFSEKLEFTVVMKNPLRAKIKPRV* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8019965 8021689 - Vvi13g624 Vvi13g624 774410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g624 515 Gene3D Cytochrome P450 37 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 Pfam Cytochrome P450 46 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g624 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vvi13g624 515 PANTHER CYTOCHROME P450 77A4 8 514 - -
Vvi13g624 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 514 - -
Vvi13g624 515 SUPERFAMILY Cytochrome P450 46 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g1059 Vvi13g624 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g624 K21995 - vvi:100245465 1019.99