Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi13g628 | ATGGAACCTCATAATAGGCATGTACAGGAACAGATTCACTCCACCTCCAACCGCCAGCTCGCTTATGGAAGGGAACACTGGTCCAGCCCCAAAGACACGACGTGCTCCAAGAGCTGGGCTCAGCAGACCGAGGAGAGCTACCAATTGCAGCTCGCTCTCGCACTTCGCCTCTCCTCCGATTCTTCTTCTGCCGCCGATCCTTATTTCTTGGATTCTGCTACCGGTGATCGCCCAATTGGGTCTGCCAGGGACCTCTCTCATCGGTTCTGGGTCAATGGCTGCCTGTCTTACATTGATAGGGTTCCAGATGGATTTTACCTGATACATGGGATGGACCCATATGTATGGACTATAAGCACTGATTTGAAAGAGACTGGTCGGATCCCATCTTTTGAATCATTGAAAGCTGTTGATCCTCGTGATGATTTCTCAATTGAAGTGGTTTTGGTTGATAAACATCGGGATCCTTCTTTAAAGGAGCTACAGAATAGGGCACTAAGTCATTCTAGTAGTTGGATTAAGGCAAAACAAGTGGTTGATGAGCTTGCAAACCTTGTCTGTAATCACATGGGGGGTGCAGCTTCTTCTGGAGAAGATGGTTTTGCCAACCACTGGAAGGAGTTTTCTGGCATGTTGAAGAACAGCCTTGGCTCTGTTGTACTTCCAATTGGAAGCTTATCTGTTGGCCTGTGTGTTCATCGTGCACTTCTATTTAAAGTGCTAGCAGATGTAGTCAACTTACCATGCCGGATTGCAAAGGGTTGCAAATATTGTAGAAGCAATGTTGCTTCCTCCTGCCTTGTGCGATTTGGCCCTGAAAGGGAGTATTTGGTTGATTTGATGTGTAATCCGGGTGCTCTGTGCTCACCTGATTCCTTGCTCAATGGTACATCTTCCATCTTAGTTTCTTCGCCCTTATGCCATCCAAGATTTAAATTGGTTGAAACGGCTGAGGACTTCAGGATATTGGCCAGACTGTATTTCTTTGACTGTCAATCACTTAATATTGCATTTGATGATCCTTCCTCAGGTGCTGCTGTTGGACAAGATGATAACTCAGATTCACGGTTCCCTAAACCTTTTGATAGGAGTTACACTGAGAGCAAGAACCTGGTATCAACTTCAAATAACCACCATGAACTTTTTCTGCCCCAAAGGACTGCACGACTTGTATCCCATGATAGAGATCCCCAGATGCAAAACTCGTTCAATCCTTTGCCAAATGTCATAAACTCAAAACACTTGGTCAAAGGTGCAGTTCGACCAAGTCACATCCTACCAATGGGTAATAGAGATGTTCAACCTATTTTGCCCTTTCCTAGGCCAAGGCCTGGTACAAATAAGAATCTGGGGTTCATGGAAAAGAATCACTCAGTAACAAGTAGATCAAGTCTAAAATATTCTCTTGTAGAGGAGGATCTGGAGATTCCGTGGAGTGAACTTGTTTTGAAGGAGAACATTGGAGCAGGTTCGTTTGGAACTGTTCATCGTGCTAAGTGGCGTGATTCAGATGTTGCTGTCAAGATTCTCATGGAGCAAGATTTCCATGCAGAGCGCTTCGAGGAATTTCTAAGAGAGGTTGCAATCATGAAACGCTTGAGGCATCCAAACATTGTTCTCTTTATGGGTGCTGTTACTCAGCCTCCACATCTGTCCATAGTTACAGAATACTTATCAAGAGGCAGCTTATATAAACTCTTGCGCATGCCTGATGCAGGCATGGTACTGGATGAGAGGCGTCGTTTAAATATGGCTTATGATGTGGCAATGGGGATGAATTATCTTCATCAACTCAAACCTCCTATTGTTCATCGAGATTTGAAGTCTCCAAATCTTTTGGTGGATGGTAATTATACGGTAAAGGTTTGTGATTTTGGTCTTTCCCGTTCAAAGGCAAACACATTTCTTTCATCTAAAACGGCCGCAGGGACACCTGAGTGGATGGCACCAGAAGTTCTCCGTGATGAGCCATCAAATGAAAAGTCAGATGTTTACAGCTTTGGTGTAATCTTGTGGGAACTTGTGACCTTGCAAAGGCCTTGGAAACATTTAAATCCAGCTCAGGTTGTAGCAGCTGTTGCTTTCAAGGGAAAAAGGCTTGAGATTCCAGCTGAAGTAAATCATCAAGTCGCCTACTTGATTGAGGCCTGCTGGGCTAATGAGCCCTCGAAGCGTCCTCCTTTCTCCTTTATCAAGGAATACTTGCAGCCACTGATCTCATCCTCACCTCAACCATTTCAAGGGTCACATTCCAGAAATTACCCGAAGGGTGGTTAA | 2277 | 44.75 | MEPHNRHVQEQIHSTSNRQLAYGREHWSSPKDTTCSKSWAQQTEESYQLQLALALRLSSDSSSAADPYFLDSATGDRPIGSARDLSHRFWVNGCLSYIDRVPDGFYLIHGMDPYVWTISTDLKETGRIPSFESLKAVDPRDDFSIEVVLVDKHRDPSLKELQNRALSHSSSWIKAKQVVDELANLVCNHMGGAASSGEDGFANHWKEFSGMLKNSLGSVVLPIGSLSVGLCVHRALLFKVLADVVNLPCRIAKGCKYCRSNVASSCLVRFGPEREYLVDLMCNPGALCSPDSLLNGTSSILVSSPLCHPRFKLVETAEDFRILARLYFFDCQSLNIAFDDPSSGAAVGQDDNSDSRFPKPFDRSYTESKNLVSTSNNHHELFLPQRTARLVSHDRDPQMQNSFNPLPNVINSKHLVKGAVRPSHILPMGNRDVQPILPFPRPRPGTNKNLGFMEKNHSVTSRSSLKYSLVEEDLEIPWSELVLKENIGAGSFGTVHRAKWRDSDVAVKILMEQDFHAERFEEFLREVAIMKRLRHPNIVLFMGAVTQPPHLSIVTEYLSRGSLYKLLRMPDAGMVLDERRRLNMAYDVAMGMNYLHQLKPPIVHRDLKSPNLLVDGNYTVKVCDFGLSRSKANTFLSSKTAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELVTLQRPWKHLNPAQVVAAVAFKGKRLEIPAEVNHQVAYLIEACWANEPSKRPPFSFIKEYLQPLISSSPQPFQGSHSRNYPKGG* | 759 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8150738 | 8202754 | - | Vvi13g628 | Vvi13g628 | 774414 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi13g628 | 758 | ProSiteProfiles | Protein kinase domain profile. | 481 | 739 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi13g628 | 758 | PRINTS | Tyrosine kinase catalytic domain signature | 555 | 568 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi13g628 | 758 | PRINTS | Tyrosine kinase catalytic domain signature | 596 | 614 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi13g628 | 758 | PRINTS | Tyrosine kinase catalytic domain signature | 643 | 653 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi13g628 | 758 | PRINTS | Tyrosine kinase catalytic domain signature | 662 | 684 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi13g628 | 758 | PRINTS | Tyrosine kinase catalytic domain signature | 706 | 728 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi13g628 | 758 | SMART | serkin_6 | 481 | 739 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi13g628 | 758 | Pfam | Protein tyrosine and serine/threonine kinase | 482 | 735 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi13g628 | 758 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 602 | 614 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi13g628 | 758 | ProSitePatterns | Protein kinases ATP-binding region signature. | 487 | 508 | IPR017441 | GO:0005524 | |
Vvi13g628 | 758 | Gene3D | Phosphorylase Kinase; domain 1 | 474 | 559 | - | - | |
Vvi13g628 | 758 | CDD | STKc_MAP3K-like | 487 | 735 | - | - | |
Vvi13g628 | 758 | Gene3D | Transferase(Phosphotransferase) domain 1 | 560 | 746 | - | - | |
Vvi13g628 | 758 | SUPERFAMILY | Protein kinase-like (PK-like) | 457 | 735 | IPR011009 | - | |
Vvi13g628 | 758 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 82 | 288 | - | - | |
Vvi13g628 | 758 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 28 | 748 | - | - | |
Vvi13g628 | 758 | PANTHER | MAP KINASE KINASE KINASE-LIKE PROTEIN | 28 | 748 | - | - | |
Vvi13g628 | 758 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76172 | PF07714 | PK_Tyr_Ser-Thr | 1.30E-69 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi13g628 | K14510 | - | vvi:100264370 | 1526.53 |