Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g774 ATGGATGCGCTGAGTGAGAGAGCGGCGATGATGAGAGAGTCAGTGCAGAAGAGCCAGACCATCAGCGACAGCATCGTCTCCATTCTCGGCTCCTTCGACCACCGTCTCTCTGCCCTCGAAACTGCCATGCGTCCCACTCAGATTAGAACGCATTCTATTCGAAGAGCTCATGAGAATATTGACAAGACTTTGAAGGCTGCCGAGGTTATATTGGCTCAATTCGACCTTTATCGTCAGGCAGAGGGTAAAGTACTCAGAGGGCCACAGGAGGACCTAGAAAGTTACTTGGAATCTATTGATCAGCTAAGAAGCAATATTCGTTTTTTTAGCAGCAACAAAAGCTTCAAGAGTAATGATGGGGTGGTCAACCATGCAAATAATTTACTTGCCAAGGCAATTTCTAAGCTAGAAGAGGAGTTTAAGCAACTCTTATCATCTTACAGCAAACCTGTGGAGCCTGACCGTCTCTTTGATGGTCTCCCCAACTCACTGCGACCCTCCTCAGGATCTCCAGGAAACCAGGCTGACTCTAGCATTAAGGCTCTGTCCAACAATCATTCTGAGCACCAGAACAGTAACTTAGAAACTGCTGTTTATACACCTCCAACTCTTATACCACCTAGGGTTCTGCCATTGCTGCATGATTTAGCCCAACAAATGGTTCAAGCGGGGCACCAACAGCAGTTACTGAAGATTTACAGGGACACCCGTTCTTCAGTTTTTGAAGAAAGCCTCCGCAAATTGGGTGTGGAAAAGCTTAGCAAAGATGATGTTCAGAAGATGCAATGGGAGGTTTTGGAGGCTAAGATTGGGAATTGGATTCATTTCATGCGGATTGCTGTTAAACTATTGTTTGCTGGGGAACGAAAAGTTTGTGATCAAATATTTCAAGGCTTTGATTCACTCAGTGATCAGTGTTTTGCTGAAGTTACTGCAAGTAGTGTTTCGGTGCTACTTAGTTTTGGTGAGGCTATTGCTAGAAGCAAGAGATCCCCAGAAAAATTATTTGTGCTTCTAGACATGTATGAGATAATGCGGGAACTTCACTCAGAGATAGAAACAATTTTCAAGGGCAAAGCTTGCACTGAAATTAGAGAATCTGCATTGGGTTTGACAAAGCGGCTGGCCCAGACTGCTCAAGAAACCTTTGGTGATTTTGAAGAAGCAGTTGAAAAAGATGCAACAAAAACTGCTGTGTCTGATGGAACTGTTCATCCTTTGACAAGCTATGTGATCAACTATGTGAAGTTTCTTTTTGACTATCAATCAACACTGAAGCAACTCTTTCAAGAATTCGAAAACGAAAAAGAAACGACTTCTCAGTTAGCATCAGTAACAATGCGAATAATGCATGCTCTTCAAACCAATTTGGATGGGAAATCTAAGCAGTATAAAGATCCTGCTTTGACTCACTTATTTCTTATGAACAATATTCACTACATGGTCCGATCTGTGCGTAGGTCTGAAGCCAAAGATTTATTAGGGGATGATTGGGTGCAAAGACATCGAAGGATTGTGCAGCAGCATGCAAATCAGTACAAGAGGAATGCCTGGGCAAAGATTCTGCAGTGTCTCACCATTCAAGCGCTGACCTCCTCTGGTGGGGGTAGTACAGTCGGTACTGATGGTGGAAATAGTAGTGGAGTTTCAAGGGCAATGGTTAAAGACAGGTTCAAGACATTTAATATGCAGTTTGAGGAGCTGCATCAGAAACAATCTCAGTGGACAGTTCCTGACACTGAGCTGCGAGAGTCTCTGAGGCTTGCAGTTGCTGAAGTGTTGTTACCAGCGTACAGAAATTTCATTAAACGTTTTGGGCCACTGGTTGAGAGTGGGAAGAATCCCCAGAAGTACATTCGATTCACAGCAGAGGATCTGGAACGGATGCTGGGTGAATTTTTTGAGGGTAGAACCTTGAATGAAGCCAAGCGATAA 1935 43.77 MDALSERAAMMRESVQKSQTISDSIVSILGSFDHRLSALETAMRPTQIRTHSIRRAHENIDKTLKAAEVILAQFDLYRQAEGKVLRGPQEDLESYLESIDQLRSNIRFFSSNKSFKSNDGVVNHANNLLAKAISKLEEEFKQLLSSYSKPVEPDRLFDGLPNSLRPSSGSPGNQADSSIKALSNNHSEHQNSNLETAVYTPPTLIPPRVLPLLHDLAQQMVQAGHQQQLLKIYRDTRSSVFEESLRKLGVEKLSKDDVQKMQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFQGFDSLSDQCFAEVTASSVSVLLSFGEAIARSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACTEIRESALGLTKRLAQTAQETFGDFEEAVEKDATKTAVSDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFENEKETTSQLASVTMRIMHALQTNLDGKSKQYKDPALTHLFLMNNIHYMVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLTIQALTSSGGGSTVGTDGGNSSGVSRAMVKDRFKTFNMQFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRNFIKRFGPLVESGKNPQKYIRFTAEDLERMLGEFFEGRTLNEAKR* 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13478267 13512087 - Vvi13g774 Vvi13g774 774560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g774 644 SUPERFAMILY Cullin repeat-like 70 635 IPR016159 -
Vvi13g774 644 Gene3D Exocyst complex component Exo70 68 644 - -
Vvi13g774 644 MobiDBLite consensus disorder prediction 155 179 - -
Vvi13g774 644 Coils Coil 126 146 - -
Vvi13g774 644 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 641 IPR004140 GO:0000145|GO:0006887
Vvi13g774 644 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 30 641 - -
Vvi13g774 644 MobiDBLite consensus disorder prediction 163 179 - -
Vvi13g774 644 Pfam Exo70 exocyst complex subunit 272 631 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g774 K07195 - vvi:100253247 1237.63