Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g857 ATGGCGCAGGTCATGAACATGCCCCTCGACTCCCTCGAAAAGCCCGACAAATCCCCCTCCGCCACCGCTGACGCCGTCGCTGACGATGACTCTGCGCCACCACCGCCACCACCTCCGCCTCCGTCGCAGCCCCAACAGACTTTGCCCGTTAGGCGGAGGGACAGAGATTCCAGGGAGAGGATGGACGATAGGGACGGCGATCGCCCTCGTAATCGCCGCGGCAGCGGCGCCGATCACTACGACCGGAACCTGTCTCCTCCGCCACGGGACCGAGAGAGGGACTTCAAGCGCCGCCGTAGCCCCAGCCCTCCTTACCGCGACCGCCGCCACTCACCGCCGCGCCGCTCCTCTCCGCCATTGCATTTCAAGCGCTCTCGGAGAGATGATGGCGGCTATGATAGGCGGGGAAGTCCCCGTGGTGGGTTTGGCCCAGATGACAGAAGGTTTGGCTATGATTATATTGGTGGTTATGAACGGATGGGAGGCCGGCCTGGATATCCTGATGAAAAATCTCATGGTCGGTTTATGAATCGTTCAGATTGGGAATCTAATCGTGGTGGTTATGCTGACTTGTTAGACACAGGAAGTAAACAAAGAGAAGGTTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATATATTACCAGCTGAAGCTGAGCGCAGGTATCAAGAATATAGATCAGAATACATTTCTACTCAGAAGCGTGCCTTCTTTGATGCTCATAAGGATGAGGAGTGGTTGAAAGACAAGTACCATCCAACAAATTTACTTGCAGTCATTGAAAGGAGGAATGAAAATGCTCGACGGATGGCAAAGGATTTTTTACTTGATTTGCAGAGTGGAACCTTGGACATAGGCCCTGGTGTAAATGCCTCGTCATCAAACAAATCAGGGCAAACCAGTGATCCAAACTCTGATGATGAAACTGAGACTGGTGACAAACGAAGACGACATGGTAGGGGACCGATCAAAGAAAGTGATCTTTCGACTGCTGCAGTGGCTCATCCAAACAGTTCTGAGCCTAGACGAATACAAGCTGATATAGAACAAGCACTGGCTCTTGTGCGCAAGCTTGATTCTGAAAAAGGGGTTGAAGATAATATTTTATGCAGTGCTGAACAAAAAAAGACGGACAGTGATAAATCTCACAGTGGATCCATGGGCCCTATTATAATCATACGAGGTTTAGCGTCTGTCAAGGGCCTTGAAGGAATTGAGCTATTGGACACAATTCTTACTTATCTTTGGCGTATCCATGGTTTGGATTACTATGGCATGGTTGAAACAAGTGAAGCCAAGGGTCTTCGGCATGTGAGAGCAGAGGGAAAGGGTCATGAAGAAAATAGTAAAGCTGGGGCTGACTGGGAAAAGAAATTAGACTCTCGTTGGCAAGACAGGTTGAGGGGTCAGGATCCCTTGGAAACAATGGCTGCTAAAGAGAAGATAGATGCAGCAGCTGTTGAAGGTTTAGATCCATATGTACGAAAAATAAGAGATGAGAGGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGTTGCACAAAGCTCTTCCATGCAGCTGAATTTGTGCATAAGCATCTGAAGTTGAAACACCCTGAACTCGTCATGGATCTGACTACGAAAGTGCGTGAGGATCTGTATTTCCAAAACTATATGAATGATCCAGATGCTCCTGGTGGGACACCTGTCATGCAGCAGCAGCTGCTGAAAGACAGGCTACAGAGGCGTAGGCCTGGTCTGGATAATCGATTGAAAGATGATCGTGGTAACAGGAGGGAACATGACAGGATTGAAAGAATTAACGACGGAGGAAATCTTGATGAATCCATGTATGATACTTATGGTGGGAAAGACTTGGGTGTCATTCCGCCTTTTCCCTCAGATATGGGTCCTCCTCCAGTCTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCTTTTGTTCCTGCACCACCTGAGGTTGCAATGCGTATGTTAAGGGAGCAGGGAGGCTCATCCTCATATGAAGGTGGTAGACAAATGCGTACTGGTCCCCATATTGGGGGACCGGCACCGATCCTTGGTGTATCATCTGCTTTTAGACAAGATCCTCGACGATTACGAAGTTATCAAGATCTGGATGCCCCAGAGGATGAAGTGACCGTGATAGACTACAGGAGCTTGTAG 2175 49.15 MAQVMNMPLDSLEKPDKSPSATADAVADDDSAPPPPPPPPPSQPQQTLPVRRRDRDSRERMDDRDGDRPRNRRGSGADHYDRNLSPPPRDRERDFKRRRSPSPPYRDRRHSPPRRSSPPLHFKRSRRDDGGYDRRGSPRGGFGPDDRRFGYDYIGGYERMGGRPGYPDEKSHGRFMNRSDWESNRGGYADLLDTGSKQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAFFDAHKDEEWLKDKYHPTNLLAVIERRNENARRMAKDFLLDLQSGTLDIGPGVNASSSNKSGQTSDPNSDDETETGDKRRRHGRGPIKESDLSTAAVAHPNSSEPRRIQADIEQALALVRKLDSEKGVEDNILCSAEQKKTDSDKSHSGSMGPIIIIRGLASVKGLEGIELLDTILTYLWRIHGLDYYGMVETSEAKGLRHVRAEGKGHEENSKAGADWEKKLDSRWQDRLRGQDPLETMAAKEKIDAAAVEGLDPYVRKIRDERYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMDLTTKVREDLYFQNYMNDPDAPGGTPVMQQQLLKDRLQRRRPGLDNRLKDDRGNRREHDRIERINDGGNLDESMYDTYGGKDLGVIPPFPSDMGPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGSSSYEGGRQMRTGPHIGGPAPILGVSSAFRQDPRRLRSYQDLDAPEDEVTVIDYRSL* 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16040739 16066729 + Vvi13g857 Vvi13g857 774643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g857 724 Pfam Arsenite-resistance protein 2 451 630 IPR007042 -
Vvi13g857 724 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 724 - -
Vvi13g857 724 MobiDBLite consensus disorder prediction 578 608 - -
Vvi13g857 724 MobiDBLite consensus disorder prediction 667 693 - -
Vvi13g857 724 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 724 IPR039727 GO:0006397
Vvi13g857 724 Pfam SERRATE/Ars2, N-terminal domain 206 287 IPR021933 -
Vvi13g857 724 MobiDBLite consensus disorder prediction 289 346 - -
Vvi13g857 724 ProSitePatterns Zinc finger C2H2 type domain signature. 511 534 IPR013087 -
Vvi13g857 724 MobiDBLite consensus disorder prediction 30 46 - -
Vvi13g857 724 MobiDBLite consensus disorder prediction 289 308 - -
Vvi13g857 724 MobiDBLite consensus disorder prediction 1 150 - -
Vvi13g857 724 MobiDBLite consensus disorder prediction 310 327 - -
Vvi13g857 724 MobiDBLite consensus disorder prediction 49 114 - -
Vvi13g857 724 MobiDBLite consensus disorder prediction 122 146 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g888 Vvi13g857 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g857 - - vvi:100266053 1278.46