Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g904 ATGGACGGGCAAGGCAAGGTGGTGTGCGTGACCGGAGCTTCTGGGTACATAGCCTCATGGCTTGTGAAGCTCCTGCTCCAACGCGGCTACACCGTCAAAGCCACAGTTCGAGACCCAAATGATCCAAAGAAGACAGAACACTTGCTTGCACTTGAAGGTGCTAAAGAAAGGCTTCATTTGTTTAAAGCAAACTTACTTGAAGAAGGATCCTTTGATTCTGTGGTTGATGGATGTGATGGAGTATTTCATACAGCATCCCCAGTTGTGCTGATAGTTGACGATCCCCAGGCACAACTAATTGACCCAGCACTAAAAGGAACAATGAGCGTTCTAGGATCTTGTGCAAAAGTTCCATCTGTCAAAAGAGTAGTTGTAACATCATCTATGGCTTCAGTTGCATTCAATGGGAAACCTCTAGCTCCTGATGTGCTAGTTGATGAGAGTTGGTTTTCAGATCCAGTTTTCTGTGAGAAATCAAAGCTATGGTATATGCTTTCAAAGACATTAGCTGAGGAGGCTGCTTGGAAGTTTGCAAAAGAGAATGGGATTGACATGGTTACAATAAATCCAGGGTGGGTGATTGGCCCTCTCTTACAGCCTACTCTTAATCTAAGTGTGGAGGAAGTTCTGAAGCTACTAAAAGGAGATACATTTCCCAATAAAACACATCGATGGGTTGATGTTAGAGATGTTGCCATGGCACATATTCAAGCATATGAGCTTCCAACGGCTAGAGGCAGATACTGTTTAGTAGGGAGCATTTTACACTGTTCTGAGACAATGAAGATTTTGCGCAAGCTCTACCCTGCTTTAAACCTACCTGAGAAATGTGCAGACGACAAGCCTTATGAACCAGCCTATATGGTGTCCCAGGAGAAAACTAAAAGTTTGGGCATTGACTTCACTCCTCTGGAGGTGAGCCTGAAGGACACTGTGGAAAGCTTGAGGGAGAAGAACTTTGTCAGTTTCTGA 972 44.34 MDGQGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALEGAKERLHLFKANLLEEGSFDSVVDGCDGVFHTASPVVLIVDDPQAQLIDPALKGTMSVLGSCAKVPSVKRVVVTSSMASVAFNGKPLAPDVLVDESWFSDPVFCEKSKLWYMLSKTLAEEAAWKFAKENGIDMVTINPGWVIGPLLQPTLNLSVEEVLKLLKGDTFPNKTHRWVDVRDVAMAHIQAYELPTARGRYCLVGSILHCSETMKILRKLYPALNLPEKCADDKPYEPAYMVSQEKTKSLGIDFTPLEVSLKDTVESLREKNFVSF* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17662338 17673587 + Vvi13g904 Vvi13g904 774690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g904 323 CDD FR_SDR_e 8 298 - -
Vvi13g904 323 Pfam NAD dependent epimerase/dehydratase family 8 242 IPR001509 -
Vvi13g904 323 Gene3D - 6 323 - -
Vvi13g904 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 321 - -
Vvi13g904 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 316 IPR036291 -
Vvi13g904 323 PANTHER CINNAMOYL-COA REDUCTASE 1-LIKE 2 321 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g904 - - vvi:100855275 652.129