Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g92 ATGCGGCATGTTGCCGAGACGATGCAGCTTGATTTGGAGGATTTATACATCCACGTCGGATGGCCTTTATACCGAAAATATGGTCATGCTTTTGAGGCATTTAAGATAATTGTGACTGATCCTGATTCAGTTCTGAATTCCCTCACTCGTGAAGTTAAAGAAGTTGGCCCTGATGGACAGGAGGTGACAAAGGTGGTCCCTGCTATATCTGAGGAAGTGAAGGATGCTTTGGTAAAGAATATTAGGAGAAGAATGACTCCACAACCATTGAAAATTCGGGCTGATATTGAAATGAAATGTTTCCAGTTTGATGGTGTTCTTCACATTAAGGAAGCAATGCGGAAAGCAGAAGCGGCGGGCAATAAGGATTGTCCAGTGAAAATTAAACTGGTTGCTCCTCCGCTTTATGTTCTTACTACTCAGACGCTTGACAAGGAGCAAGGAATGTCAATTCTCAATAATGCCATTGCTGCTTGCACAGAAGAAATTGATTGCCACAAAGGAAAGCTTATCGTAAAGGAGGCACCCAGAGCTGTGAGTGAACGGGACGATAAACTACTTGCTGAGCATATGGCTAAGCTAAGTCATCAGAACGAGGAAATCAGTGGCGATGAAGGCAGTGAAGAAGAGGAAGACACTGGCTTGGGAGACATTGATGTAGAGAACTCAGGTCCTGGCATAACAGACTGA 690 44.06 MRHVAETMQLDLEDLYIHVGWPLYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGQEVTKVVPAISEEVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNKDCPVKIKLVAPPLYVLTTQTLDKEQGMSILNNAIAACTEEIDCHKGKLIVKEAPRAVSERDDKLLAEHMAKLSHQNEEISGDEGSEEEEDTGLGDIDVENSGPGITD* 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 952023 956469 - Vvi13g92 Vvi13g92 773878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g92 229 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 229 IPR011488 GO:0003723|GO:0003743
Vvi13g92 229 MobiDBLite consensus disorder prediction 191 229 - -
Vvi13g92 229 SUPERFAMILY eIF-2-alpha, C-terminal domain 88 204 IPR024055 -
Vvi13g92 229 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT ALPHA-RELATED 1 229 - -
Vvi13g92 229 Pfam Eukaryotic translation initiation factor 2 alpha subunit 15 145 IPR011488 GO:0003723|GO:0003743
Vvi13g92 229 Gene3D EIF_2_alpha 90 212 IPR024055 -
Vvi13g92 229 Gene3D Translation initiation factor 2; subunit 1; domain 2 1 57 IPR024054 -
Vvi13g92 229 SUPERFAMILY eIF2alpha middle domain-like 1 88 IPR024054 -
Vvi13g92 229 MobiDBLite consensus disorder prediction 203 217 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g676 Vvi13g92 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g92 K03237 - vvi:100250061 441.039