Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g922 ATGACATCAACACTACTGCCGACATTCAGAGTTACATGGCCGCTGAAAACTCCTGGGATTGAGTTGTCTGGGTTTGCTGTTGGTCTTGCTGCTGTTGGCCTCGCTGCTGTCTACTTTTTCTATGGAAGAAGGAAGCCCAAAGGCTGCTTAGACCCAGAAAGATTCCAGGACTTCAAACTAGTCCAGAAAACTCGAATCAGCCACAATGTTGGGAGGTTTAGGTTCGCCCTTCCCACGCCTACCTCAGTGTTTGGTCTTCCTGTTGGACAACATATAATTTGCAGGGGAAAAGATGACCAAGGTGCAGAAGTTATCAGGCCATATACCCCAATTACTTTGGATTCAGATGTTGGTTTCTATGAACTAGTTGTAAAGATGTATCCGAAGGGACAGATGTCCCACCATTTCAGAAAGATGCGTGAAGGCGATACCCTGGCTGTAAAGGGACCCCGGGGGCGTTTGATATATAAACCTGGCCAAGCTAAAGCATTTGGGATGCTTGCTGGAGGGACTGGCATTACCCCAATGTTCCAGCTAACAAGAGCCATATTAGAGAATCCAAAAGACAAAACTAATGTGCATCTTATATATGCCAACATCTCATATGATGACATTCTTTTGAAGGATGAATTAGATGGCTTTGCTCGCAAATTCCCTAATCGTTTCAAGGTTTTTTATGTTCTTAGTCAGCCTCCTGAAGCATGGAATGGTGGCATTGGACATATATCCAAAGAAATGATTGAAAAGCACTGCCCAGCCCCAGCACCTGATATTCAGATATTGAGGTGCGGTCCACCGGGCATGAACAAGGCAATGGCTGGTCATCTTGTGGCCCTTGGATACACTCCCCAAATGCAGTTTGAGTTCTGA 870 45.52 MTSTLLPTFRVTWPLKTPGIELSGFAVGLAAVGLAAVYFFYGRRKPKGCLDPERFQDFKLVQKTRISHNVGRFRFALPTPTSVFGLPVGQHIICRGKDDQGAEVIRPYTPITLDSDVGFYELVVKMYPKGQMSHHFRKMREGDTLAVKGPRGRLIYKPGQAKAFGMLAGGTGITPMFQLTRAILENPKDKTNVHLIYANISYDDILLKDELDGFARKFPNRFKVFYVLSQPPEAWNGGIGHISKEMIEKHCPAPAPDIQILRCGPPGMNKAMAGHLVALGYTPQMQFEF* 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18236829 18251417 - Vvi13g922 Vvi13g922 774708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g922 289 Gene3D - 148 289 IPR039261 -
Vvi13g922 289 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 165 184 IPR001709 GO:0016491
Vvi13g922 289 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 203 214 IPR001709 GO:0016491
Vvi13g922 289 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 259 267 IPR001709 GO:0016491
Vvi13g922 289 PANTHER NADH-CYTOCHROME B5 REDUCTASE 9 289 IPR001834 GO:0016491
Vvi13g922 289 Pfam Oxidoreductase NAD-binding domain 166 272 IPR001433 GO:0016491
Vvi13g922 289 CDD cyt_b5_reduct_like 58 289 - -
Vvi13g922 289 PRINTS Cytochrome B5 reductase signature 203 214 - -
Vvi13g922 289 PRINTS Cytochrome B5 reductase signature 106 113 - -
Vvi13g922 289 PRINTS Cytochrome B5 reductase signature 165 184 - -
Vvi13g922 289 PRINTS Cytochrome B5 reductase signature 84 95 - -
Vvi13g922 289 PRINTS Cytochrome B5 reductase signature 142 156 - -
Vvi13g922 289 PRINTS Cytochrome B5 reductase signature 259 267 - -
Vvi13g922 289 Gene3D Translation factors 48 147 - -
Vvi13g922 289 Pfam Oxidoreductase FAD-binding domain 58 156 IPR008333 -
Vvi13g922 289 SUPERFAMILY Riboflavin synthase domain-like 46 158 IPR017938 -
Vvi13g922 289 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 53 157 IPR017927 GO:0016491
Vvi13g922 289 PANTHER NADH-CYTOCHROME B5 REDUCTASE 9 289 - -
Vvi13g922 289 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 143 285 IPR039261 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g922 K00326 - vvi:100259177 581.252