Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g925 ATGGCCTCTAACCGACCACTTTTGATCCCATCTCCTCGAACCCCAGCTGTTGAAGATCTTCCAACCATACCCATCTTCGCTGATCTAGCAAAACCCAATTCTGAAAACCCCAAATTGGTTATGCGTATGGATTCCAATAACCCACTTGGGAATCACACAAATACTGAACCCACCTTGAATTCATCTTCTCGGCGAAGTATCTCGTCGCTTAGTGATGAGGATGCAAGGTTGATCTATATTAATGATCCAGAAAAGAGTAATGAAAGATATGAGTTCGCAGGGAACACTGTTAGGACTGGGAAGTATTCTATTCTCACTTTTTTGCCTCGGAACTTGTTTGAACAATTTCATAGGATTGCATACATATATTTCCTCGTGATTGCGATCCTTAATCAGCTCCCTCAGCTGGCCGTTTTTGGCCGGACAGCTTCCGTACTGCCTTTAGCCATTGTTTTGTTAGTTACTGCCATTAAGGATGCATACGAGGACTGGAGGAGGCACCGGTCAGACCAAATTGAGAACAATAGGATGGCACGGGTGCTTGGGGATGATGGGTTTCAAGAGAAAAAATGGAAGAACATCCGCGTTGGTGAAATCATCAAAATCTCAGCTAATGATACTCTTCCTTGTGACATAGTGCTGCTCTCTACCAGTGATCCTACTGGGGTTGCTTATGTGCAGACCATTAATTTGGATGGGGAGTCAAACTTGAAGACCCGGTATGCTAGGCAGGAGACCATTTCGAGAATGTCCCAGAAGGAGAGGATGAGTGGGTTGATCAAGTGTGAGAAGCCTAGCAGGAACATATATGGGTTTCAGGGAAACATGGAGGTTGATGGGAAACGCTTGTCGCTTGGACCATCCAATATTGTACTTCGAGGTTGTGAGCTTAAGAATACTACATGGGCAATTGGGGTTGCTGTGTATTGTGGTCGTGAGACGAAAGCAATGCTCAATAACTCTGGTGCTCCATCAAAGAGGAGCCGACTTGAGACCCACATGAATCGGGAGACCCTTTTTCTCTCTGCATTTCTTATTTCTTTTTATGCTAAGGGAAAGCCAGAAAATTATAACTATTATGGTTGGGGTTGGGAGATACTTGTCCGGGTTGGTCAGGCATACTTCATGATCCAAGATAATAAATTGTATGATGAGGCCTCAAATTCAAGGTTCCAGTGCAGGGCTTTGAATATAAATGAAGATCTAGGACAAATCAAATATGTATTCTCAGATAAAACTGGTACACTGACGGAGAACAAGATGGAATTTCAATGTGCAAGCATTTGGGGAGTAGATTACAGAGGTGGGACAACCTGCATGCAAGGAGATGGATATTCTGTTCAAGTTGATGGGCAGGTCTGGAGGCCAAAGATGAAGGTGAAAGTTGACCTGGAGCTTGAACGACTATCAAAAAGTGGAAAGCAGACAGAAGAAGGCAAACACATCCATGATTTTTTTCTTGCATTGGCAGCTTGCAATACAATTGTGCCTATTGTAGTAGACACATCTGATCCTGCTGTGAGGTTGATAGATTATCAAGGGGAATCTCCAGATGAACAGGCATTGGTTTATGCTGCTGCTGCTTATGGTTTTATGCTCATGGAACGAACCTCTGGCCATATAGTTATTGATGTTCATGGAGAAAGACAAAGGTTTGATGTTTTGGGTTTGCATGAGTTTGATAGTGACCGTAAAAGGATGTCAGTTATATTGGGGTGCCCTGACAACACTGTGAAAGTTTTTGTAAAAGGTGCTGACACATCCATGTTTAGCATAATTGATAAATTTTCAAACATGAACATTATACGTGCAACTGAAAGTCATCTTCATAATTTCTCCTCTCTGGGTCTGAGAACACTTGTTGTTGGGATGCGGGATCTCAATGGTTCTGAATTTGAGCAATGGAAGTTTGCCTTTGAGACAGCAAGCACTGCTTTGATTGGAAGGGCAGCTTTACTTCGCAAGATTGCTAGCAATATAGAAAATAATCTCAGCATATTGGGTGCCTCTGGAATCGAAGATAAATTGCAGCAGGGTGTGCCGGAAGCAATAGAGTCTTTGAGAATGGCAGGGATTAAAGTGTGGGTTTTGACTGGAGACAAGCAAGAAACTGCCATATCAATTGGCTACTCATCAAAACTCTTAACAAGCAATATGACCCGGATTATAATCAATAACAACTCTAAGGAGTCTTGTAAAAAGAGTTTAGAAGATGCTATTGTTACATCTAAGACACTCATGACACAGTCTGTTGCCTTGATTATTGATGGTACCAGCCTTGTTTATGTTCTTGACGGTGAACTTGAAGAACAGCTCTTTCAGTTGGCTAGTGGATGTTCTGTGGTACTGTGTTGCCGAGTAGCTCCACTGCAAAAAGCTGGAATTGTTGCCCTCATAAAGAAAAGGACTGATGATATGACCCTTGCCATTGGGGATGGTGCTAATGATGTTTCAATGATACAAATGGCTGATGTGGGAATTGGTATCAGTGGCCAAGAGGGCCGTCAAGCTGTCATGGCATCAGATTTTGCAATGGGGCAGTTCAGATTTTTGGTTCCACTTTTATTAGTTCATGGTCATTGGAATTACCAGCGGATGGGCTACATGATACTGTACAATTTTTACAGGAATGCTGTGTTTGTTCTTGTCTTGTTCTGGTACGTGCTATATACTTGCTTCAGTGTGACAACTGCGATTAATGAATGGAGCAGTGTGTTGTATTCTGTAATCTACAGCTCTGTGCCTACAATTGTTGTTGCAATTCTTGACAAGGACCTAAGTAGTAGGACTCTTCTAAAGCATCCTCAGCTCTATGGATCTGGGCACAGGCAAGAGTGTTACAACTCAAAATTATTTTGGTTAACAATGCTGGACACTGTGTGGCAGAGTGGTGTCATCTTCTTTGTACCTCTATTTGCATATTGGAGTAGCGTTGTTGATGGGTCAAGCATTGGAGATCTCTGGACACTTGCAGTGGTGATTTTGGTCAACATACACTTGGCCATGGATGTTATTCGGTGGACTTGGATTGTTCATGCAGCCATTTGGGGATCTATAGTTGCAACTTGCATTTGCGTCATTATCATTGATGCTATACCTTCATTACGTGGTTACTGGGCCATTTTCCATATAGCAAAGACGGGTTCATTCTGGCTGTGCTTGCTTGGTATCCTTGTTGCAGCTGTCCTACCTCGTTTTGTTGTAAAAGTTCTATACCAATACTTCACTCCTTGTGATGTTCAGATTGCAAGAGAAGCTGAGAAGTTTGGGTATTCAAGGGAGTTAGAAGGCATGCAGATAGAAATGAACACAATCTTGGAGCCTCGACAGAGATGA 3336 42.6 MASNRPLLIPSPRTPAVEDLPTIPIFADLAKPNSENPKLVMRMDSNNPLGNHTNTEPTLNSSSRRSISSLSDEDARLIYINDPEKSNERYEFAGNTVRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAILNQLPQLAVFGRTASVLPLAIVLLVTAIKDAYEDWRRHRSDQIENNRMARVLGDDGFQEKKWKNIRVGEIIKISANDTLPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYARQETISRMSQKERMSGLIKCEKPSRNIYGFQGNMEVDGKRLSLGPSNIVLRGCELKNTTWAIGVAVYCGRETKAMLNNSGAPSKRSRLETHMNRETLFLSAFLISFYAKGKPENYNYYGWGWEILVRVGQAYFMIQDNKLYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYRGGTTCMQGDGYSVQVDGQVWRPKMKVKVDLELERLSKSGKQTEEGKHIHDFFLALAACNTIVPIVVDTSDPAVRLIDYQGESPDEQALVYAAAAYGFMLMERTSGHIVIDVHGERQRFDVLGLHEFDSDRKRMSVILGCPDNTVKVFVKGADTSMFSIIDKFSNMNIIRATESHLHNFSSLGLRTLVVGMRDLNGSEFEQWKFAFETASTALIGRAALLRKIASNIENNLSILGASGIEDKLQQGVPEAIESLRMAGIKVWVLTGDKQETAISIGYSSKLLTSNMTRIIINNNSKESCKKSLEDAIVTSKTLMTQSVALIIDGTSLVYVLDGELEEQLFQLASGCSVVLCCRVAPLQKAGIVALIKKRTDDMTLAIGDGANDVSMIQMADVGIGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLYTCFSVTTAINEWSSVLYSVIYSSVPTIVVAILDKDLSSRTLLKHPQLYGSGHRQECYNSKLFWLTMLDTVWQSGVIFFVPLFAYWSSVVDGSSIGDLWTLAVVILVNIHLAMDVIRWTWIVHAAIWGSIVATCICVIIIDAIPSLRGYWAIFHIAKTGSFWLCLLGILVAAVLPRFVVKVLYQYFTPCDVQIAREAEKFGYSRELEGMQIEMNTILEPRQR* 1112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18282058 18291699 + Vvi13g925 Vvi13g925 774711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g925 1111 Gene3D - 506 642 IPR023299 GO:0000166
Vvi13g925 1111 Gene3D - 148 319 - -
Vvi13g925 1111 MobiDBLite consensus disorder prediction 43 68 - -
Vvi13g925 1111 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 367 1085 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Vvi13g925 1111 SUPERFAMILY Calcium ATPase, transduction domain A 175 316 IPR008250 -
Vvi13g925 1111 MobiDBLite consensus disorder prediction 46 68 - -
Vvi13g925 1111 ProSitePatterns E1-E2 ATPases phosphorylation site. 411 417 IPR018303 -
Vvi13g925 1111 SFLD Haloacid Dehalogenase 393 861 - -
Vvi13g925 1111 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 367 1106 - -
Vvi13g925 1111 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 69 347 - -
Vvi13g925 1111 CDD P-type_ATPase_APLT_Dnf-like 94 970 - -
Vvi13g925 1111 Pfam Phospholipid-translocating ATPase N-terminal 78 143 IPR032631 -
Vvi13g925 1111 SUPERFAMILY HAD-like 396 851 IPR036412 -
Vvi13g925 1111 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 780 895 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi13g925 1111 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 367 1106 - -
Vvi13g925 1111 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 69 347 - -
Vvi13g925 1111 SUPERFAMILY Calcium ATPase, transmembrane domain M 89 1075 IPR023298 -
Vvi13g925 1111 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 415 679 IPR023299 GO:0000166
Vvi13g925 1111 SFLD p-type atpase 393 861 IPR044492 -
Vvi13g925 1111 PRINTS P-type cation-transporting ATPase superfamily signature 409 423 - -
Vvi13g925 1111 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Vvi13g925 1111 PRINTS P-type cation-transporting ATPase superfamily signature 810 829 - -
Vvi13g925 1111 Pfam Phospholipid-translocating P-type ATPase C-terminal 838 1077 IPR032630 -
Vvi13g925 1111 Pfam Cation transport ATPase (P-type) 516 590 - -
Vvi13g925 1111 Gene3D - 664 850 IPR023214 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g925 K14802 - vvi:100254060 2138.61