Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g934 ATGAGCCACTATGTTCTGGTGGTTTACAGGCATGCCTTTGCCACTGCCGTGATTGCGCCTTTTGCTATCTTCCTTGAGAGGAAGGCGCAACCAAAGATAACATTCCGCGTTTTCATGCAAATATTTGTTTTGGCTCTTCTTGGGCCTGTGATCGACCAGAACTTTTATTATGCTGGTTTGAAGCTGACTTCCCCGACCTTCTCATGCGCAATGAGCAATATGCTTCCGGCCATGACATTCGTCATGGCGGTCATATTCCGAATGGAGAAAATAGACATGAAGAGAGTAAGGTGCCAAGCAAAGGTTGTTGGGACTATTGTGACAGTGGCTGGGGCAATGGTGATGACCTTGTACAAGGGACCCATCATGGAGATGGTGTGGACTAAGCACATGCATACTTCCAAATCGGTGGGTTCGGGCACCACTTCTACCGACAAAGACTGGTTCATGGGGTCAATCTTCGTCATCATTGCAACACTTGCCTGGGCTTCTTTGTTCGTTTTACAGGCGCATGCATTGAAGACATACAAGCACCATCAGCTCTCTCTCACTACCCTTATTTGCTTTATTGGCACTCTACAAGCCATTGCTGTCACCTTTGTTATGGAACATAAAACCTCTGTTTGGACAATTGGCTGGGACATGAATCTCCTTGCAGCTGCCTATGCGGGTATTGTGACATCAAGTATTTCATACTATGTCCAAGGATTGGTGATAAAGTCAAGAGGCCCTGTGTTTGCTACTGCTTTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCCTTCATCCTCGCAGAAAAGATATTCCTTGGAGGTGTTCTTGGGGCCATCTTGATTGTTGCTGGCCTTTACTCAGTTCTATGGGGAAAGTACAAGGAGAACTTGGAGAAGAAGCAGGAGGAGGAGATACCCGAAGCCATAAAAGGCGCTCAGGGCAACGGCAATGGGCTGTCTATAATCGACGACATCCAAACAAATGATATTGAAATGCAGAAAGCAGAAGCTAAGAAGCTCTCTTCTGTCGCCATTAGCATGCCAATTCCAGAACCTCCTATGAAGGCAAACCAAGACCCAAAAGCCTAA 1089 46.46 MSHYVLVVYRHAFATAVIAPFAIFLERKAQPKITFRVFMQIFVLALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVIFRMEKIDMKRVRCQAKVVGTIVTVAGAMVMTLYKGPIMEMVWTKHMHTSKSVGSGTTSTDKDWFMGSIFVIIATLAWASLFVLQAHALKTYKHHQLSLTTLICFIGTLQAIAVTFVMEHKTSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKSRGPVFATAFSPLMMIIVAIMGSFILAEKIFLGGVLGAILIVAGLYSVLWGKYKENLEKKQEEEIPEAIKGAQGNGNGLSIIDDIQTNDIEMQKAEAKKLSSVAISMPIPEPPMKANQDPKA* 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 18659448 18661717 - Vvi13g934 Vvi13g934 774720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g934 362 PANTHER WAT1-RELATED PROTEIN 1 329 - -
Vvi13g934 362 Pfam EamA-like transporter family 2 116 IPR000620 GO:0016020|GO:0016021
Vvi13g934 362 Pfam EamA-like transporter family 150 289 IPR000620 GO:0016020|GO:0016021
Vvi13g934 362 PANTHER WAT1-RELATED PROTEIN 1 329 IPR030184 GO:0016021|GO:0022857
Vvi13g934 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 118 - -
Vvi13g934 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 189 293 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g934 - - vvi:100266045 706.057