Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi13randomg113 | ATGGCAGCGGTTGGGATACAGAAGTTTTGTTTTTTCATTGTATCTAGGAACGATGGGTATATTCAGATTTTAGCTGTATTTGATGACCTGGGTCTGAACGCTTGGGGACTCAAAATGCCCACACGGCAAGACAATACAGATTCCAACAATGGTTCTGGAACAGGGTCTTCCCTACTGGACCTCTTACGTTCAGACATCTATTGGAATTGTCGAAAGGAAGGACAAACATCTTCTGGTCCACGAGGAAGGTTGGAGAATCTTTTGTGTCAATCAGGAAATAACATTTGTGCAGATTGTGGATCTCCAGATCCAAAATGGGTATCTGTAAGTCTTGGAGTATTTATTTGTATCAAGTGTTCTGGTGTACATAGAAGCCTCGGAGCACATGTCTCAAAGGTTTTATCAATTAAGCTAGATGAATGGACAGATGAACAGGTTGATACGTTGACGGGTATGGGTGGAAACAGTGAGGCAAACATGAAGTATGAAGCTTCCATTCCGGACTACATCAGAAAACCAAGACCAGATTCCTCTACAGAGGAACGCTCTGATTTCATTAGGAGAAAATATGAGATGCAACAATTTTTCAACTCTGATGAACAGATGTTCTGCCCCTTTCCACCTCAAGAGAAGAAGCACTATGAGAAACAGACAACTACCCATCGTCTCCATGGACTTGGGCTGGCATTTCGCAATAGTTGGAGAAGAAAAGAGCCTGAGCACAAGCCTGTCAAGAAGAGCAGCTCATCGGCAGGCATGATCGAATTTGTTGGATTGATAAAGGTCAATGTAGTCAAAGGCACCAACCTAGCTGTCCGTGATGTAATGACAAGTGATCCATACGTTCTCCTTGCATTGGGACAACAATCGGTGAAGACGCGTGTCATAAAGAACAACCTTAATCCAGTATGGAATGAAAGGTTAATGTTGTCAATTCCAGAACAAATTCCACCATTAAGAGTGTTTGTGTATGACAAGGATACATTCTCAACCGATGATTTCATGGGGGAGGCCGAGATTGACATCCAACCTCTGGTTTCTGCTGCCATAGCCCACGAGAATTCCACGTTAAATGAACCAATGGAATTCGGCAAGTTGGTAGCAAGCAAAGAAAACACCCTGGTAAAAGACAGTGTCATAAGCCTGACAGATGGGAAGGTGATGCAGGACGTCAGTCTCAAACTACAGAATGTCGAAAGGGGAGTGCTGGAGATCGAGCTTGAATGTGTTCCTCTTAGTCAATAG | 1245 | 43.45 | MAAVGIQKFCFFIVSRNDGYIQILAVFDDLGLNAWGLKMPTRQDNTDSNNGSGTGSSLLDLLRSDIYWNCRKEGQTSSGPRGRLENLLCQSGNNICADCGSPDPKWVSVSLGVFICIKCSGVHRSLGAHVSKVLSIKLDEWTDEQVDTLTGMGGNSEANMKYEASIPDYIRKPRPDSSTEERSDFIRRKYEMQQFFNSDEQMFCPFPPQEKKHYEKQTTTHRLHGLGLAFRNSWRRKEPEHKPVKKSSSSAGMIEFVGLIKVNVVKGTNLAVRDVMTSDPYVLLALGQQSVKTRVIKNNLNPVWNERLMLSIPEQIPPLRVFVYDKDTFSTDDFMGEAEIDIQPLVSAAIAHENSTLNEPMEFGKLVASKENTLVKDSVISLTDGKVMQDVSLKLQNVERGVLEIELECVPLSQ* | 415 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi13randomg113 | 414 | CDD | ArfGap | 84 | 190 | - | - | |
Vvi13randomg113 | 414 | Gene3D | Arf GTPase activating protein | 68 | 203 | IPR038508 | - | |
Vvi13randomg113 | 414 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 71 | 414 | IPR044518 | GO:0005096|GO:0005543 | |
Vvi13randomg113 | 414 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED | 71 | 414 | - | - | |
Vvi13randomg113 | 414 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 250 | 348 | IPR035892 | - | |
Vvi13randomg113 | 414 | CDD | C2_ArfGAP | 257 | 401 | - | - | |
Vvi13randomg113 | 414 | SMART | C2_3c | 259 | 354 | IPR000008 | - | |
Vvi13randomg113 | 414 | PRINTS | HIV Rev interacting protein signature | 93 | 112 | IPR001164 | GO:0005096 | |
Vvi13randomg113 | 414 | PRINTS | HIV Rev interacting protein signature | 112 | 129 | IPR001164 | GO:0005096 | |
Vvi13randomg113 | 414 | PRINTS | HIV Rev interacting protein signature | 133 | 154 | IPR001164 | GO:0005096 | |
Vvi13randomg113 | 414 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 83 | 197 | IPR037278 | - | |
Vvi13randomg113 | 414 | SMART | arf_gap_3 | 81 | 203 | IPR001164 | GO:0005096 | |
Vvi13randomg113 | 414 | Pfam | C2 domain | 259 | 349 | IPR000008 | - | |
Vvi13randomg113 | 414 | ProSiteProfiles | C2 domain profile. | 238 | 355 | IPR000008 | - | |
Vvi13randomg113 | 414 | Gene3D | C2 domain | 257 | 413 | IPR035892 | - | |
Vvi13randomg113 | 414 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 81 | 203 | IPR001164 | GO:0005096 | |
Vvi13randomg113 | 414 | Pfam | Putative GTPase activating protein for Arf | 84 | 197 | IPR001164 | GO:0005096 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi13randomg113 | K12486 | - | vvi:100249811 | 715.301 |