Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13randomg92 ATGGGTATGGCCACAGAAGCTCAGTTCCATGTTCTAGCTGTTGATGACAGCATCATAGATAGAAAGCTGATTGAGAAGCTCCTCAAAACCTCTTCTTATCAAGTTACTGCTGTGGATTCTGGGAGTAAGGCCCTGGAATTTCTGGGTTTGCAAGAGGCTGAGCAGAGAAATCTAAGCCCTCCCTCTCTTTGTCCAAGCCAGGAAATGGAAGTGAATTTGATCATTACAGACTATTGTATGCCTGGGATGACTGGCTATGATCTCCTCAGAAAGATTAAGGAGTCTACATCTCTGAAAGACATACCAGTTGTGATCATGTCCTCTGAGAACATCCCTTCAAGGATTAACAGATGTTTGGAAGAAGGAGCAGAAGATTTCTTCCTGAAACCTGTTCAATTATCAGATGTGAACAAGCTTAGACCCCATCTACTGAAGGGAAAAAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGA 513 41.91 MGMATEAQFHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQEAEQRNLSPPSLCPSQEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHLLKGKKKKRKKKKRKKKKKKKKKKKKKN* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13randomg92 170 CDD REC_typeA_ARR 11 139 - -
Vvi13randomg92 170 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 159 IPR045279 GO:0009736
Vvi13randomg92 170 MobiDBLite consensus disorder prediction 138 170 - -
Vvi13randomg92 170 SMART REC_2 9 140 IPR001789 GO:0000160
Vvi13randomg92 170 Pfam Response regulator receiver domain 11 136 IPR001789 GO:0000160
Vvi13randomg92 170 Coils Coil 144 170 - -
Vvi13randomg92 170 ProSiteProfiles Response regulatory domain profile. 10 144 IPR001789 GO:0000160
Vvi13randomg92 170 SUPERFAMILY CheY-like 9 145 IPR011006 -
Vvi13randomg92 170 MobiDBLite consensus disorder prediction 142 170 - -
Vvi13randomg92 170 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 159 - -
Vvi13randomg92 170 Gene3D - 10 170 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13929 PF00072 Response_reg 7.00E-21 CL0304 Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13randomg92 K14492 - vvi:100253216 288.115