Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13randomg93 ATGGGTATGGCTGCAGAGTCACAGTTTCATGTTCTAGCTGTTGATGACAGCCTCGTAGATAGAAAGTGGATTGAAAAGCTCCTCAAAACCTCTTCTTTTCAAGTTACTGTTGTAGATTCCGTGAGTAAAGCTCTTGAATTCCTGGGTTTGCAAGAGGCAGAACAGGAAAGAAAAGTCAATTTAATTATAACAGATTATTCTATGCCTGGAATGACTGGCTATGATCTCCTCAGAAAGATCAAGGAGTCTACATCTCTTAAAGACATCCCAGTTGTGATCATGTCCTCTGAGAATATCCCTTCTAGGATTAACAGATGTCTAGAAGAAGGAGCAGAAGATTTCTTCCTGAAACCTGTTCAATTATCTGATGTGAACAAGCTTAGACCCCACCTACTTGGATGGAGGACACTTGTGGAGATTTGA 423 40.66 MGMAAESQFHVLAVDDSLVDRKWIEKLLKTSSFQVTVVDSVSKALEFLGLQEAEQERKVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHLLGWRTLVEI* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13randomg93 140 SMART REC_2 9 128 IPR001789 GO:0000160
Vvi13randomg93 140 Pfam Response regulator receiver domain 11 124 IPR001789 GO:0000160
Vvi13randomg93 140 ProSiteProfiles Response regulatory domain profile. 10 132 IPR001789 GO:0000160
Vvi13randomg93 140 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 133 IPR045279 GO:0009736
Vvi13randomg93 140 SUPERFAMILY CheY-like 8 132 IPR011006 -
Vvi13randomg93 140 CDD REC_typeA_ARR 11 127 - -
Vvi13randomg93 140 Gene3D - 3 130 - -
Vvi13randomg93 140 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 133 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13930 PF00072 Response_reg 2.20E-22 CL0304 Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13randomg93 K14492 - vvi:100248094 274.633