Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13randomg94 ATGGGTATGGCTGGAGAGTCACAGTTTCATGTTCTAGCTGTTGATGACAGCATCATAGATAGAAAATGGATTGAAAAGCTCCTCAAGACCTCTTCTTTTCAAGTTACTGTTGTAGGTTCTGTGAGTAAAGCTCTTGAATTCCTGGGTTTGCAAAAGGCAGAACAAAGAAATCATCACCAAGGAACGAAAGTAAATTTAATTATTACATATTATTCTATGCCTGGAATGACAGGCTATGATCTCCTCAAAAAGATCAAGGAGTCTACATCTCTTAAAGGCATCCCAGTTGTGATCATGTCCTCTGAGAATATCCCTTCTAGGATTAACAGATGTTTAGAAGGAGAAAAAGATTTCTTCCTGAAACCTGTTCAATTATCTGATGTGAACAAGCTTAGACCCCACCTACTTGGATGGAGGACACTCGTAGATGTTGAGGTCTCGCAAGGTTCATATACCAATTCTACAATTTTTTGTTGTGGCAAGACCCCGTAG 492 39.43 MGMAGESQFHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHHQGTKVNLIITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCLEGEKDFFLKPVQLSDVNKLRPHLLGWRTLVDVEVSQGSYTNSTIFCCGKTP* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13randomg94 163 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 141 IPR045279 GO:0009736
Vvi13randomg94 163 SMART REC_2 9 132 IPR001789 GO:0000160
Vvi13randomg94 163 ProSiteProfiles Response regulatory domain profile. 10 136 IPR001789 GO:0000160
Vvi13randomg94 163 PANTHER RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN 3 141 - -
Vvi13randomg94 163 CDD REC_typeA_ARR 11 131 - -
Vvi13randomg94 163 Pfam Response regulator receiver domain 11 128 IPR001789 GO:0000160
Vvi13randomg94 163 Gene3D - 4 142 - -
Vvi13randomg94 163 SUPERFAMILY CheY-like 8 139 IPR011006 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13931 PF00072 Response_reg 2.40E-14 CL0304 Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13randomg94 K14492 - vvi:109121942 292.737