Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13randomg95 ATGGGTATGGCTGCAGAGTCGCAGTTTCATGTTCTAGCTGTTGATGACAGCCTCATTGATAGAAAATGGATTGAGAAACTCCTCAAAACCTCTTCTTTTCAAGTTACTGTTTTAGATTCTGTGAGTAAAGCTCTTGAATTCCTGGGTGTGCAAGAGGCAGAACAGGAAAGGAAAGTCAATTTAATTATTACAGATTATTCTATGCCTGGAATGACTGGCTATGATCTCCTAAGAAAGATCAAGGAGTCTACATCTCTTAAAGACATCCCAGTTGTGATCATGTCCTCTGAGAATATCCCTTCTAGGATTACCAGATGTCTAGAAGAAGGAGCAGAAGATTTCTTCCTGAAATTAACCTGTTCAATTATCTGA 372 38.98 MGMAAESQFHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLGVQEAEQERKVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAEDFFLKLTCSII* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13randomg95 123 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 3 117 - -
Vvi13randomg95 123 CDD REC_typeA_ARR 11 117 - -
Vvi13randomg95 123 SUPERFAMILY CheY-like 8 117 IPR011006 -
Vvi13randomg95 123 Pfam Response regulator receiver domain 11 117 IPR001789 GO:0000160
Vvi13randomg95 123 ProSiteProfiles Response regulatory domain profile. 10 123 IPR001789 GO:0000160
Vvi13randomg95 123 Gene3D - 3 120 - -
Vvi13randomg95 123 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 117 IPR045279 GO:0009736
Vvi13randomg95 123 SMART REC_2 9 122 IPR001789 GO:0000160
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13932 PF00072 Response_reg 4.20E-20 CL0304 Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13randomg95 K14492 - vvi:100248094 223.016