Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13randomg96 ATGGGTATTGCTGCAGAGACACAGTTTCATGTTCTGGCTGTTGATGACAGCCTCATAGATAGAAAACTGATTGAAAAGCTCCTCAAAACCTCTTCTTTTCAAGACAGTAAACTGATTGAAAAGCTCCTCAAAACCTCTTCTTTTCAAGTTACTGCTGTGGATTCTGGGAGTAAGGCTCTGGAATTTCTGGGTTTGCAAGAGGAAGAGCAGAGAAATCATCATCCCCAAGAAACGGAAGTAAATCTAATTATTACTGATTATTCCATGCCTGGAATGACTGGCTATGATCTCCTCAGAAAGATCAAGGAGTCTTCATCTCTGAAAGACATACCAGTTGTGATCATGTCCTCTGAGAACATCCCTTCAAGGATTAACAGATGTTTGGAAGAAGGAGCAGAAGATTTCTTTCTGAAACCTGTTCAGTTATCAGATGTGAACAAGCTTAGGCCACATCTACTCGGATCCAGAACCCTTTTGGAGATTTGA 486 40.95 MGIAAETQFHVLAVDDSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHLLGSRTLLEI* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13randomg96 161 Gene3D - 4 155 - -
Vvi13randomg96 161 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 33 - -
Vvi13randomg96 161 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 35 157 - -
Vvi13randomg96 161 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 33 IPR045279 GO:0009736
Vvi13randomg96 161 PANTHER TWO-COMPONENT RESPONSE REGULATOR 35 157 IPR045279 GO:0009736
Vvi13randomg96 161 ProSiteProfiles Response regulatory domain profile. 10 153 IPR001789 GO:0000160
Vvi13randomg96 161 SUPERFAMILY CheY-like 8 149 IPR011006 -
Vvi13randomg96 161 Pfam Response regulator receiver domain 37 145 IPR001789 GO:0000160
Vvi13randomg96 161 CDD REC_typeA_ARR 11 148 - -
Vvi13randomg96 161 SMART REC_2 9 149 IPR001789 GO:0000160
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13933 PF00072 Response_reg 4.90E-19 CL0304 Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13randomg96 K14492 - vvi:100242967 275.018