Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi13randomg98 | ATGGATATGGCAATAGAGGCACAGTTCCATGTTCTTGCTGTTGATGACAACCTCATAGATAGAAAATTGATTGAAAAGCTCCTCAAAACCTCTTCTTTTCAAGTTACTGCTGTGGATTCTGGGAGCAAGGCTCTGGAATTTCTGGGTCTGCAAGAGGAAGAGCAGAGGAATCATCATCCCCAAGAAATGGAAGTAAATTTAATTATCACGGATTATTCCATGCCTGGAATGACTGGCTATGATCTCCTCAGAAAGATCAAGGAATCTTCATCTCTGAAAGACATACCAGTTGTGATCATGTCCTCTGAGAATATCCCCTCAAGGATTAACAGATGTCTGGAAGAAGGAGCAGAAGATTTCTTCCTGAAGCCGGTCCAATTATCGGATGTGAGCAAGCTTAGACCCCATTTACTGAGAAGAAAAGCTGAGGAAGAAGAAGAAAAACCCAAGAGAAATATTAGAAAAAGAAAGACAATTGAAGAGAGCCTCACCCATATGCTGATGGAGGATTTGGATAAGTTCATCTCGATTGAAGACATTTTTGGAGAGTTGAATTATGAATTCTCACATAAACGTTGGAAGTTTGGATCTTAG | 594 | 40.24 | MDMAIEAQFHVLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQEEEQRNHHPQEMEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAEDFFLKPVQLSDVSKLRPHLLRRKAEEEEEKPKRNIRKRKTIEESLTHMLMEDLDKFISIEDIFGELNYEFSHKRWKFGS* | 198 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi13randomg98 | 197 | PANTHER | RESPONSE REGULATOR RECEIVER DOMAIN PROTEIN | 3 | 162 | - | - | |
Vvi13randomg98 | 197 | CDD | REC_typeA_ARR | 11 | 133 | - | - | |
Vvi13randomg98 | 197 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 162 | IPR045279 | GO:0009736 | |
Vvi13randomg98 | 197 | SMART | REC_2 | 9 | 134 | IPR001789 | GO:0000160 | |
Vvi13randomg98 | 197 | Pfam | Response regulator receiver domain | 11 | 130 | IPR001789 | GO:0000160 | |
Vvi13randomg98 | 197 | SUPERFAMILY | CheY-like | 9 | 149 | IPR011006 | - | |
Vvi13randomg98 | 197 | Gene3D | - | 10 | 182 | - | - | |
Vvi13randomg98 | 197 | ProSiteProfiles | Response regulatory domain profile. | 10 | 138 | IPR001789 | GO:0000160 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13934 | PF00072 | Response_reg | 2.60E-22 | CL0304 | Vvi | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi13randomg98 | K14492 | - | vvi:100265255 | 380.178 |