Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1005 ATGAGATTTGTCATCTCTGCGTTTTTCTTTCTTATGATGTTTTCTTACACAGCTGCATATGATCCCTTGGATCCTAATGGAAACATTACTATCAAATGGGATATCATGTCTTGGACCCCAGATGGCTATGTGGCGGTGGTGACAATGCACAACTTCCAAATGTACCGGCACATCATAAGCCCAGGTTGGACCTTGGGATGGACCTGGGCTAAGAAAGAAGTGATATGGTCCATGGTGGGAGCTCAAACCACTGAACAAGGAGACTGCTCCAAGTTCAAAGGGAACATACCACATTGCTGTAAGAAAACCCCCACAGTGGTAGACTTGCTCCCTGGGGTTCCTTACAACCAACAGTTCTCTAATTGCTGCAAAGGGGGAGTGGTGTCCTCATGGGGCCAAGATCCTGCTGCTTCTGTCTCTGCCTTCCAAGTGAGTGTGGGGCTAGCTGGTACTTCCAACAAGACCGTGAAGCTTCCCAAGAACTTCACATTGCTAGGGCCAGGTCCTGGCTACACCTGTGGGATTGCAAAGATTGTGCCCCCCACCAATTTCCTCACACCTGACCGCCGCCGCAAAACTCAGGCACTTATGACATGGAATGTGACTTGCACTTATTCACAGCTCCGCGCCCGGAAAAATCCAAGTTGCTGTGTCTCCTTCTCTTCTTTCTACAATGAAACAATCACTCCTTGCCCTTCTTGTGCTTGTGGCTGCCAAAACAAAAATAACTGTGTCCAGAGCGATTCCAAACTTCTGAGTATGGTGGGAATAAACACTCCAAGAAAAGATAACGTACCTCTGCTGCAATGCACGCACCACATGTGCCCGGTTCGGGTGCACTGGCATCTGAAGATCAACTATAAGGACTACTGGCGTGTGAAGGTCTCCATAACCAATTTCAACTACAGGCTGAACTACACATTGTGGACCCTTGTTGTTCAGCATCCAAACCTCAACAATGTTACTCAAGTTTTTAGCTTTGATTACAAGCCTCTGGTCCCCTATGAGTCCATAAATGACACAGGTATGTTCTATGGCATGAAATTCTATAATGACCAGCTCATGGAGGCTGGGCCATTTGGTAATGTTCAGTCAGAGGTGCTTTTTCAGAAGGACAACTCTTTCACCTTTAAGCAAGGCTGGGCATTTCCTCGGAAAGTCTACTTCAATGGTGATGAGTGCATGCTGCCCCTACCTGAGACATATCCATTTCTGCCCAACTCTGCTCATCAAAACCTACTTGCTTTCTCAACCTTCATTTCTTCGGTGATTTTCCTGCTGGTCACTGTTTGGTGA 1296 46.99 MRFVISAFFFLMMFSYTAAYDPLDPNGNITIKWDIMSWTPDGYVAVVTMHNFQMYRHIISPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVSSWGQDPAASVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGIAKIVPPTNFLTPDRRRKTQALMTWNVTCTYSQLRARKNPSCCVSFSSFYNETITPCPSCACGCQNKNNCVQSDSKLLSMVGINTPRKDNVPLLQCTHHMCPVRVHWHLKINYKDYWRVKVSITNFNYRLNYTLWTLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDQLMEAGPFGNVQSEVLFQKDNSFTFKQGWAFPRKVYFNGDECMLPLPETYPFLPNSAHQNLLAFSTFISSVIFLLVTVW* 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23525330 23527758 + Vvi14g1005 Vvi14g1005 776072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1005 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Vvi14g1005 431 PANTHER COBRA-LIKE PROTEIN 6 428 - -
Vvi14g1005 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Vvi14g1005 431 PANTHER PROTEIN COBRA 6 428 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1005 Vvi17g445 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1005 - - vvi:100244586 925.62