Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1006 ATGGGGTTTTGTTTGTCACTCATCAGCAGATCCATTTCCAGTTTCTGTGGTTGCACCATTTTGCTTCTTTTTCTGCTTTCTTGCTCCTGCTTTACTTCTACAGAAGCCTATGATGCACTGGATCCCAATGGAAATATCACGATCAAATGGGATATTATGAGCTGGACTCCAGATGGCTATGTTGCTGTTGTCACTATGTACAATTTCCAGCAATATCGTCACATTCAATCGCCAGGATGGTCACTGCAATGGACATGGGCAAAAAAGGAGGTGATATGGAGCATGTTGGGAGGCCAAACTACAGAGCAAGGGGATTGTTCTAGATTTAAGGGAAATGTACCACATTGTTGTAAAAAAGATCCTACTGTTGTGGATCTATTGCCAGGAACTCCCTACAATCAGCAGATTGCAAATTGCTGCAAGGGAGGTGTAGTCAGTTCATGGGTGCAGGATCCTGCCAATGCAGCAAGCTCATTCCAGGTTAGTGTAGGTTCAGCTGGTACCACCAACAAAACAGTTCGAGTTCCTAAGAACTTCACCCTGAAAGCACCAGGGCCTGGCTATACTTGTGGACCTGCGAAGATCGTTAAACCTACTAGATTTGTGACACAAGATGGAAGGAGAGTCACTCAAGCTTTGATGACATGGAATGTTACATGCACGTATTCACAATTCCTGTCTCAGAAAACCCCCACTTGCTGTGTCTCGCTCTCATCTTTCTACAATGACACAATTGTACCCTGCCCAACATGCACCTGTGGTTGCCAGAACAACATTACTCAGCCAGGGAGCTGTGTAGAGGAAGACTCGCCATATTTGGCTTCAGTTGTCTCAGGTTCTGGGAAGAATAGCTATACTCCTCTAGTCCAGTGTACGAAGCATATGTGTCCCATTCGAGTCCATTGGCATGTTAAGCTTAGCTACAAGGAGTATTGGCGAGTGAAGGTCACAATTACGAATTTCAATTACAGGATGAATTATACGCAGTGGAACTTAGTTGTCCAGCACCCCAACTTTGATAATCTGACCCAGATTTTCAGCTTTAACTACAAGTCATTGACACCCTATGCAGCTATAAATGATACTGCCATGCTATGGGGGGTTAAGTTCTACAATGATCTGCTCGTGCAAGCTGGCCCTCTTGGAAATGTACAGTCAGAGCTACTCTTTCGGAAGGATAAATCAACTTTCACTTTTGAGAAGGGTTGGGCTTTCCCTCGAAGAATCTATTTCAATGGAGATAATTGTGTCATGCCTCCTCCTGATTCCTATCCGTGGTTGCCAAATGCCACCTCACGGACAATGGCATAG 1311 44.7 MGFCLSLISRSISSFCGCTILLLFLLSCSCFTSTEAYDALDPNGNITIKWDIMSWTPDGYVAVVTMYNFQQYRHIQSPGWSLQWTWAKKEVIWSMLGGQTTEQGDCSRFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVVSSWVQDPANAASSFQVSVGSAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTRFVTQDGRRVTQALMTWNVTCTYSQFLSQKTPTCCVSLSSFYNDTIVPCPTCTCGCQNNITQPGSCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNYRMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAMLWGVKFYNDLLVQAGPLGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNATSRTMA* 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23527884 23532718 - Vvi14g1006 Vvi14g1006 776073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1006 436 PIRSF COBRA 8 436 IPR006918 GO:0010215|GO:0031225
Vvi14g1006 436 PANTHER PROTEIN COBRA 15 436 IPR006918 GO:0010215|GO:0031225
Vvi14g1006 436 PANTHER COBRA-LIKE PROTEIN 15 436 - -
Vvi14g1006 436 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1006 Vvi17g446 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1006 - - vvi:100263436 927.932