Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1007 ATGGATTCGTCTGTTACTCGAGCTCAAGCCTTCGGACAAGCCGAGATTAACTGGGACAAGCTTGATAAAACTAAGTTTTATGTCGTAGGAGCAGGCCTCTTTACGGGGCTTACAATGGGGTTGTACCCAGTCTCTGTTATAAAAACCAGGCTGCAGGTTGCTTCAGGGGATGCTGTTGAGAGAAATGCATTTTCTGTTATCAAAGGCATACTGAGAATGGATGGGATTCCTGGTTTGTACAGAGGGTTTGGCACGGTCATCACTGGTGCAGTTCCTGCCAGGATTATTTTCCTTACAGCTTTAGAGACTTCTAAAGTGGCTGCTTTCAAGATGGTTGAACCATTTAAGCTATCTGAAACTACCCAGGCAGCTGTAGCAAATGGAATTGCTGGCCTGACTTCGGCACTTTTTTCTCAGGCTGTCTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTACAAGGATATTCAGGCCATCAGAAGTATAATGGGGGCCTGGATGTTGCTCGTAAGATTATAAAGTCTGATGGCATTCGGGGGTTATATAGAGGTTTTGGTCTATCTGTTATGACTTATGCACCATCTAGTGCTGTATGGTGGGCAAGTTACGGTTCAAACCAACGATTCATCTGGAGGGTCGTAGGGAATGGCACTGACCTTGAGAAAGAATCTCCTAGCCAGGGGACAATAGTTGCAGTTCAAGCTACTGGAGCAATTATTGCAGGTGTTACAGCATCCTGCATCACAACTCCAATGGACACAATTAAAACTCGCTTACAGGTCTTGGAACATGAAGGTAGAAAAACAACCACAAAACAAGTTGTCAAAAGTTTGATTGCAGATGATGGTTGGAAAGGTTTATACAGAGGGCTGGGTCCAAGGCTTTTCAGCATGTCAGCATGGGGAACCTCAATGATTTTAGCATACGAATATCTGAAACGCTTGTGTGCTAAAGATGGACAAATATGA 972 44.03 MDSSVTRAQAFGQAEINWDKLDKTKFYVVGAGLFTGLTMGLYPVSVIKTRLQVASGDAVERNAFSVIKGILRMDGIPGLYRGFGTVITGAVPARIIFLTALETSKVAAFKMVEPFKLSETTQAAVANGIAGLTSALFSQAVFVPIDVVSQKLMVQGYSGHQKYNGGLDVARKIIKSDGIRGLYRGFGLSVMTYAPSSAVWWASYGSNQRFIWRVVGNGTDLEKESPSQGTIVAVQATGAIIAGVTASCITTPMDTIKTRLQVLEHEGRKTTTKQVVKSLIADDGWKGLYRGLGPRLFSMSAWGTSMILAYEYLKRLCAKDGQI* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23552674 23569797 + Vvi14g1007 Vvi14g1007 776074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1007 323 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 320 - -
Vvi14g1007 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Vvi14g1007 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Vvi14g1007 323 SUPERFAMILY Mitochondrial carrier 19 313 IPR023395 -
Vvi14g1007 323 Pfam Mitochondrial carrier protein 236 319 IPR018108 -
Vvi14g1007 323 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Vvi14g1007 323 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Vvi14g1007 323 Gene3D Mitochondrial carrier domain 27 322 IPR023395 -
Vvi14g1007 323 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 320 - -
Vvi14g1007 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 316 IPR018108 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1007 K15121 - vvi:100254860 636.336