Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1010 CTCCCGCGTGCTGCACTTTTCCAATTTTCACCCTTTTCCTTTTTTTTTTTCTTTTTCTTTTTACTAACAGCCCAGCCCACTTCACATGGCTTTTTAAAAAAAACCACCAGCCCACTTGCTCCAAGCCCAACTCAAAAACTAAGCCCAATCCATTATTATTGTTATTATTTCTTTTCTTTTATTTTCTTTTCTTTTCTTTATTCTAATTACCCAGCTGATCCCTTTATTTTCGGTTTCATCAAATTAATGAGTTTGGATCAAATCAATCCCATGCTCACCTTGGCTGTCTATCTTTCTTCCTTCTTTCTTCAATTCCTCATCTCCATGGCCGGGGATGAGTCTCCGCCTTATAGGCCCACTGATAATATTCTCCTCGACTGCGGCTCATCCATCAACACAAAGTCTCCTGACGGCAGGACTTGGCAAGGTGATCAAGGGTCAAAATTCTCTGGAACTTCTGATGTTCAAAACTCATCCTCATCATCCAAAGCTTTCCGGCAAGACCCATCGGTCGACCAAGTTCCATACATGACCGCTCGTATCTTTAACTCCTCGTTCACATACAGCTTCCCTGTTTCAGCCGGACCCAAGTTTGTCCGCTTCTACTTCTACCCAACTGCGTACTCTGGCCATAATGAATCCGAGTTCTTCTTCTCCGTCACATCAGGGGTGTACACCCTCCTAAGCAACTTCAGCGCTTCTCTTACAGTTGCTCCTATGGGGTCCGGAGTATCTTCCCTTGTTAAAGAATTTTCCATCAACGTGTGGGACAACCAAATACTCAATATAACCTTCTCTCCATCCCCAAACTCCTGGGCCTTCGTTAATGGTATTGAAGTCGTTTCCATGCCAAATCATCTCTACGGACAAATTGACCTTAAATTGGTTTCCGCGGTTCAGCAATTTGAAATGGATAACTACACAGCCCTTGAAACTGTTTATCGTTTAAATGTTGGTGGCAATCATATCCCGGCGGAAGCAGACAGTGGAATGTTTCGGTCCTGGAGTCAGGATGACTCTTACATATACGGAGGAAATTTGGGGTTGACACCTAACCTGGATATCCGCATACAATACACTCAGACGACACCGCCTTACATTGCACCACGTACAGTCTACACCACTTCACGCACCATGACTAAACAAGAGGAGATAAATAAGAGAACCAACTTGACGTGGCTCTTCCATGTGGATTCTGGGTTTTATTATCTTGTTAGGCTTCATTTCTGCGAGTTGCAATTGGAGGTAACCCGTCCAGGTGAACGAGTTTTTTCTATATTTCTTAACAATCAGACAGCTGAAGAAGAAATGGACGTCATCGTTAGGAGTGGTGGCACAGGATATCCAATTTATCAAGATTATGTTGTTTATTTGTTATCCGATGGCAGCCGAAGGAAGCAGGAGCTGTGGCTCGATTTACATCCTAATGCGGATAGCAAGTATGCTAACGTAATATTAAATGGATTAGAGATGTTCAAGTTAAATAATTCCAACGGTAGTCTCGCAGGACTCAATCCTGATCCGGTACTAAATCCTCCTCCCTCGGAACAGCACCCAAACTCCCCGGTAAAGCCCAACAATAGGGCGCCACTGGTGCTGATAACAGTCATTGTAGCTGCGGTCGGCGGAGTAGTCGCACTCTCTCTTCTCTGGTTCTTGGTTCTCCGACCGCGGATGAGAGTGAAACACGTTGGTGGCATCAGTCGGGCAAAGTCATCTTGGGTCCCATTTTCCTACACGACAAGGTCCACAAGCACCAACGGCTCGTCACTACCGGCCGATATCTGCCGCCACTTCTCCCTTGCCCAGATTAAAGACGCCACATGCAACTTCAACAAGAACTTCATCATCGGCGAGGGAGGGTTCGGAAACGTTTACAAAGGCTTCATCAAAGGCGGCTCCACCACGGTTGCGGTTAAACGGCTGAATCCATCATCAAAACAAGGTGCCCGCGAATTCGAAACAGAGATCAGAATGCTGTCCAAGCTCCGCCACATCCATCTCGTGTCTATGATCGGTTACTGTGATGAAGAAGGAGAGATGATCCTTGTCTACGATTACATGGCTCGTGGCACTCTTCGTGATCATCTTTATAAAACAAAAAACCCTCCACTCCCATGGAAGCAACGCCTTCAAGTCTGCATTGGGGCGGCGCGTGGATTACACTACCTTCACACAGGCGCGAAGCATACAATCATTCACCGGGACGTCAAATCCACCAATATCCTGTTAGACGAGAAATGGGTGGCCAAGGTTTCGGATTTCGGGTTGTCTAGAGTAGGCCCCACGAGTATGACCCAGACCCACGTCAGCACAGCAGTGAAGGGCAGTTTCGGTTACGTGGATCCAGAGTATTTCCGGTTGCGGCAGTTGACGGAGAAGTCTGACGTGTACTCGTTCGGAGTGGTGCTGTTTGAAGTGTTATGCGCTAGGCCGGCGGTGATTCCCGACGCTCCAGAAAAGCAGGTGTGTTTAGCAGAGTGGGGCCGGAGATCTTATCGGAAAGGAGCCCTAGTTCGGATCATGGACCAAAATCTGAGGGACGAGGTTGCGCCAGAGTGTTTGAAAAAGTTTGGGGAGATCGCTGATAGCTGCGTGCGTGACAAGGGAATCGAACGGCCACCAATGAGCGATGTGGTGTGGGCCCTTGAGTTTGCACTGCAGCTCCAGGAGACGGCGGAAAGGAACTCCCAAATCAACAGTGGGGATGAGGTGTACATTGGTCGGGTTGGAATCAAACCGGACGGCTCACAACCGAGCCCAATTACTGTGACACGTGGAGGTACCAGCACCAGTGATCACGATGACCTGATCTCAGTGTCAAGCTCAAGCACTACCGTCACGTCTAGGGTGAGCACTAGTCAAATGAGCGTCCCCAGTTACGACCACGTCAGATGGCTTCTACCCCGGTTTATGTTGACTTAG 2925 47.86 LPRAALFQFSPFSFFFFFFFLLTAQPTSHGFLKKTTSPLAPSPTQKLSPIHYYCYYFFSFIFFSFLYSNYPADPFIFGFIKLMSLDQINPMLTLAVYLSSFFLQFLISMAGDESPPYRPTDNILLDCGSSINTKSPDGRTWQGDQGSKFSGTSDVQNSSSSSKAFRQDPSVDQVPYMTARIFNSSFTYSFPVSAGPKFVRFYFYPTAYSGHNESEFFFSVTSGVYTLLSNFSASLTVAPMGSGVSSLVKEFSINVWDNQILNITFSPSPNSWAFVNGIEVVSMPNHLYGQIDLKLVSAVQQFEMDNYTALETVYRLNVGGNHIPAEADSGMFRSWSQDDSYIYGGNLGLTPNLDIRIQYTQTTPPYIAPRTVYTTSRTMTKQEEINKRTNLTWLFHVDSGFYYLVRLHFCELQLEVTRPGERVFSIFLNNQTAEEEMDVIVRSGGTGYPIYQDYVVYLLSDGSRRKQELWLDLHPNADSKYANVILNGLEMFKLNNSNGSLAGLNPDPVLNPPPSEQHPNSPVKPNNRAPLVLITVIVAAVGGVVALSLLWFLVLRPRMRVKHVGGISRAKSSWVPFSYTTRSTSTNGSSLPADICRHFSLAQIKDATCNFNKNFIIGEGGFGNVYKGFIKGGSTTVAVKRLNPSSKQGAREFETEIRMLSKLRHIHLVSMIGYCDEEGEMILVYDYMARGTLRDHLYKTKNPPLPWKQRLQVCIGAARGLHYLHTGAKHTIIHRDVKSTNILLDEKWVAKVSDFGLSRVGPTSMTQTHVSTAVKGSFGYVDPEYFRLRQLTEKSDVYSFGVVLFEVLCARPAVIPDAPEKQVCLAEWGRRSYRKGALVRIMDQNLRDEVAPECLKKFGEIADSCVRDKGIERPPMSDVVWALEFALQLQETAERNSQINSGDEVYIGRVGIKPDGSQPSPITVTRGGTSTSDHDDLISVSSSSTTVTSRVSTSQMSVPSYDHVRWLLPRFMLT* 975
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23689668 23694625 + Vvi14g1010 Vvi14g1010 776077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1010 974 CDD STKc_IRAK 617 884 - -
Vvi14g1010 974 Pfam Protein tyrosine and serine/threonine kinase 616 881 IPR001245 GO:0004672|GO:0006468
Vvi14g1010 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Vvi14g1010 974 MobiDBLite consensus disorder prediction 916 945 - -
Vvi14g1010 974 ProSiteProfiles Protein kinase domain profile. 611 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1010 974 Gene3D - 122 284 - -
Vvi14g1010 974 Gene3D - 308 494 - -
Vvi14g1010 974 Gene3D Transferase(Phosphotransferase) domain 1 688 907 - -
Vvi14g1010 974 Pfam Malectin-like domain 125 493 IPR024788 -
Vvi14g1010 974 MobiDBLite consensus disorder prediction 134 167 - -
Vvi14g1010 974 PANTHER PUTATIVE-RELATED 110 949 - -
Vvi14g1010 974 MobiDBLite consensus disorder prediction 918 945 - -
Vvi14g1010 974 SUPERFAMILY Protein kinase-like (PK-like) 581 885 IPR011009 -
Vvi14g1010 974 MobiDBLite consensus disorder prediction 503 523 - -
Vvi14g1010 974 ProSitePatterns Protein kinases ATP-binding region signature. 617 640 IPR017441 GO:0005524
Vvi14g1010 974 PANTHER OS07G0166700 PROTEIN 110 949 IPR045272 GO:0004714|GO:0006468
Vvi14g1010 974 SMART serkin_6 611 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1010 974 Gene3D Phosphorylase Kinase; domain 1 595 687 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76187 PF12819 Malectin_like 1.10E-43 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1010 - - vvi:100244676 1747.25