Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1013 ATGAGGAATACTGGCAACAGATGCCTCTGTTTAATCATTCCATCCATTCTCACCCCTGTCTATCTCTTTATCTTCCTCCACCACCTCACCATCCCCATCGCCGGTTACAGCCCTACAGAAAACTTCGCCATCAATTGTGGCTCCAGCGGAAATTCACAAGAATTGGGCAGGAACTGGATGGGCGACATTGATTCCAAATTTTCCCCCTTGGAAAACGGCACGTCAACAACATCTTCTGCGGATGAACCACCCTTTTTATCAGTTCCCTATTCCACAGCGCGGCTATCTCGCTATGAGTTCACATACTCATTTCCCCTCACAGCCGGCCAGAAATACATTCGCTTGCACTTTCATCCATCTTCATACGGGGGGGAGTTCGATAGGTCTACAGCTATTTTCTCGGTCAAAACTGGTGGTGGCTACACTCTTCTTAGCAACTTCAGTGGTGCCCTTGTTGCTGATTCTGATCTTGGTAGGGAAAAGATACTGAAAGAATTTTGTATCAACTTCAAGGAAGAAGGTGAGAAGCTGAATATAACATTCGCTCCCACTGCGGGTGAAGATGCATACGCTTTTATTAACGGAATTGAAATTGTCTCCATGCCCGACTATCTCTACTACACTTCTCCACAAGATGGAGGGTTTAAGTTTATTGGTCAACATAATTCATTTTTCGTTGAAACCGATCATGCTCTGGAAAATTTATACCGACTAAACGTAGGTGGGCAATCTCTTTCGCCCATGGATGACACCGGCATGTTCCGTACTTGGGATGCAGACGATGAGTATCTTCCGAAACTAGCATTTGTACCCGTCAACGGAAGCATTACTCTCAAATTCATCCAAATACCAAATTACACGGCACCTCTTGATGTCTACCGCACCGCCCGGACCATGGGAAACAACAAAACTGAGAACATGGGATACAATCTTACTTGGTCTTTGCCTGTGGACTCTGGTTTTAGTTACCTGCTTAGATTACATTTTTGCGAGTTCCAACCAGAGATCCAGCAGCAGCAGGACAGGGAGTTCACGATTTTCATAGCTAACCAGACGGCGGAGAATCATGCAGACGTGATCAAATGGAGCGGCGGAAACGGAGTTCCCATTTACAGAGATTATGGGGTAATGATGCCAAGCCAGGGAAGGAACAAAAAACAAAAGCTCTACATACAATTGCATCCTAACCCGGATTATGAAACCCTTTACAGTGATGCAATCCTCAACGGAATCGAGCTGTTCAAACTCATCAATCCCAATTCAGACCAACAGCCTACCTCGAGGGAAAGTAACAAAATGAAGCTTGTTGCAATTACCGGAGGTGTGGTTTGCGGTGTAGTTGCAGTCTCAGTTTTATATTTCTTTGTCGTGCATCAAATGAAGAGAAATAGAGATCCTAGCCTCAGAGACGGAGCACTATGGTGGGGCCCAGTTTTTTATATTTTGGGTACGTCCACCGAGACCCATCGCTCATCTCTAACATCCGATCTGAGCCATCATTTCAGTCTGCAAGATATCAAGACGGCCACCAAGAACTTTGACAAGGGATACATCGTCGGAGAGGGAGGCTTTGGTAACGTGTATAAAGGGTATATCAGTGGAGGAACCACACCGGTGGCAATCAAACGCCTAAATCCTGAGTCACAGCAGGGGGCCCACGAATTCATGACTGAGATCGAGATGCTTTCCCAGCTGCGTCACATTCATCTTGTGTCTCTCATTGGTTACTGCAACCATAAACGTGAGATGATCCTTGTGTACGAGTACATGGCCAATGGCAACCTCCGCGATCATCTCTAA 1800 46.0 MRNTGNRCLCLIIPSILTPVYLFIFLHHLTIPIAGYSPTENFAINCGSSGNSQELGRNWMGDIDSKFSPLENGTSTTSSADEPPFLSVPYSTARLSRYEFTYSFPLTAGQKYIRLHFHPSSYGGEFDRSTAIFSVKTGGGYTLLSNFSGALVADSDLGREKILKEFCINFKEEGEKLNITFAPTAGEDAYAFINGIEIVSMPDYLYYTSPQDGGFKFIGQHNSFFVETDHALENLYRLNVGGQSLSPMDDTGMFRTWDADDEYLPKLAFVPVNGSITLKFIQIPNYTAPLDVYRTARTMGNNKTENMGYNLTWSLPVDSGFSYLLRLHFCEFQPEIQQQQDREFTIFIANQTAENHADVIKWSGGNGVPIYRDYGVMMPSQGRNKKQKLYIQLHPNPDYETLYSDAILNGIELFKLINPNSDQQPTSRESNKMKLVAITGGVVCGVVAVSVLYFFVVHQMKRNRDPSLRDGALWWGPVFYILGTSTETHRSSLTSDLSHHFSLQDIKTATKNFDKGYIVGEGGFGNVYKGYISGGTTPVAIKRLNPESQQGAHEFMTEIEMLSQLRHIHLVSLIGYCNHKREMILVYEYMANGNLRDHL* 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23763888 23765688 + Vvi14g1013 Vvi14g1013 776080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1013 599 SUPERFAMILY Protein kinase-like (PK-like) 482 599 IPR011009 -
Vvi14g1013 599 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Vvi14g1013 599 Pfam Protein tyrosine and serine/threonine kinase 518 599 IPR001245 GO:0004672|GO:0006468
Vvi14g1013 599 Gene3D - 40 201 - -
Vvi14g1013 599 Gene3D - 231 416 - -
Vvi14g1013 599 ProSiteProfiles Protein kinase domain profile. 513 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1013 599 Pfam Malectin-like domain 44 415 IPR024788 -
Vvi14g1013 599 Gene3D Phosphorylase Kinase; domain 1 481 589 - -
Vvi14g1013 599 PANTHER OS07G0166700 PROTEIN 25 599 IPR045272 GO:0004714|GO:0006468
Vvi14g1013 599 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 25 599 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g23 Vvi14g1013 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76188 PF12819 Malectin_like 1.50E-51 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1013 - - vvi:100853107 1223.38