Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1016 ATGTCAAGACAACCAACATTTTATTGGATCATAAATGGGTGGCTAAATACTTCATCAGCTACCATGAGAAATACCAGCTACAAACGCCTTTCTCCAAACGTCCTTTCATTTATTATCCCTCTTTATCTCCTCGTCCTCCACTTCTTTCCGATCCCTATCACCGGTGACTCCCCACCTCTCTACAATCCTACTGATATCTATACCGTTGACTGTGGTGCGTCCGGGAATTTAAAAGCATGGGATAACCGAATCTGGATCGGAGACACCAATTCCCGATTCTCCCTCATAGAAAAAAACAAGGCGTCTATAATCTCAAAGGCAGCTAAGACATCCCCCTCAGTTGATCCCGTCCCCTTCGCCACCGCACGACTATCTCGCTTCCAATTCGCTTACATATTTCCTGTCACAACCGGCCAGAAATTCATTCGCTTGCACTTCTATCCATCTTCCGTTGCGGGCTTTGATAGATCAAAGGCTTTTTTCTCAGTTAAGATCGGTGGCTATACACTTCTTAACAACTTCAGTGCTGCACTCGCTGCTGATGCCCATGGGGATGAAACCGTATCGAAAGAATTCTGTGTCAATGTCAAACAAGGAGATCAGATGCTGAACATAACATTCACTCCAACGGCCAGTGATCCAGATGCATACGCTTTTATTAACGGAATTGAAATTGTCTCCATGCCCGACTATCTCTACTATACTTCCCCACAAAATGGAGGGATTCAGTTTATCGGCCAAAAAAATAATTCATTTTTCGTTGAAACAGATCATGCTCTGGAAAATGTATACCGACTAAACGTAGGTGGGAAATCTCTTTCGCCCACGGATGACACCGGCATGTTCCGTACTTGGGATGCGGACGATGAATACTGTGTGAAACTAGCATTTGTACCCGCCAACACCAGCATTAATCTCAAATTCACCCAAATACCAAATTACACGGCACCTCTTGATGTCTACCGCACCGCCCGGACCATGGGAAACAACAAAACTGAGAACATGGGATACAATCTGACTTGGTTTTTGCCTGTGGACTCTGGTTTTAGTTACCTGCTTAGATTACATTTTTGCGAGTTCCAACCAGAGATCCAGGAGCAGCACGACAGGGAGTTCGCGATTATCATAGCCAACCAGACGGCGGAGAATCATGCAGACGTGATCACATGGAGCACGGGAAATGGAGTTCCCATATACAAAGATTATGGGGTAATGATGCCAAGCCAGGGAAGTAACAAAAAACAAAACCTCTACATACAACTGCATCCTAACCCGGATTCTGAAACCGTTTACAATGATGCAATCCTCAACGGAATCGAGCTATTCAAACTCAGCAATCCTGAAAAAAGCCTCGCCGGGCCCAATCCAGATCCATCGGAGGCTCCTGCCCCACCACCGCCTGTACAGTCTACCTCGCCCAAGAGAAACAAAACAAAGCTTATCGCAATTGCCGGTAGCGTGGTCGCAGGCCTAATCGCGCTCTCTGTTATAGTTCTCTTTATTGTCTGGCGAGGAAGGAGAGTAAGAGACTCCGAACCCAGCGATGGAGGATCATGGTGGGGCCAATTTTCTTATACCTCGGTGAAGTCCACGAAGACCAGCCGCTCATCTCTGCCCTCCGATCTGTGCCGTCACTTCACTCTGCAAGAAGTCAAGGTGGCCACTAACAACTTCGACCAAGTCTTCATCATCGGCGTCGGAGGCTTTGGGAACGTGTACAAAGGGTATATCAACGGCGGAACAACACCGGTGGCAATCAAACGGTTGAATCCAGAGTCACAGCAGGGGGCCCAGGAATTCCAGACTGAGATCGAGATGCTTTCCCAGCTCCGCCACCTTCATCTGGTATCTCTAATTGGCTACTGCAACGACGATCGCGAGATGATCCTCGTGTACGATTACATGGCCCACGGCACTCTCCGCGATCATCTCTACAAAACAGATAATCCTCCATTGTCGTGGAAGCAGAGGCTCGAGATTTGCATTGGCGCAGCTCGAGGGTTGCACTATCTTCATACAGGTGTGAAGCACACGATCATTCACCGGGATGTGAAGACAACCAACATCCTTTTGGATGAGAAATGGGTGGCCAAAGTTTCGGATTTCGGATTGTCAAAGATGGGCCCTACCAGCATGTCGAACGCCCACGTCAGCACAGTGGTGAAGGGTAGTTTCGGGTATTTGGACCCAGAGTATTACCGGCGGCAACAGCTAACGGAGAAATCCGACGTGTACTCATTCGGTGTAGTACTGTTTGAAGTACTGTGCGCGAGGCCACCCCTGAATCAGACGGTGGAGAAAGAGCGGGTCAGTCTAGCACAGTGGGCCCCGGCCTGCTATCGAGATGGGAAGCTCGAACAGATCGTTGATCCGTTTTTAAAGGGTAAGATAGCGCCGGACTGTCTGCAGAAGTTTGGGGAGATCGCAGTGAGTTGTTTGCAGGATCAGGGGATCGAACGGCCATCCATGAGCGATGTGGTGTGGGGCCTTCAATTTGCAATGCAGCTACAGGAGAGCGCGGAGCAGGAGATGGAGAAGAGTGGGTCGTGGAGAAAAGTGAAGGACGAAGAAGCCCCACTGAAGGCCTCCATTACTGATGATAGTGACGATGCGTACGTGTTAACTAGTGATAGTGGAGGCACGTGGGATTCGAAGAGTAGTGGGGTAATGATACAATCTAGTGGAGAAGAAAAAAGTTCAACCAGTTGTGAATCTGATGCGCTGATGTCAGTACCTAAAGCCTTTTTTTTTTTCCTGATAAATAATAGCCTAGCCTTCCAAGTAGGTACTTATTGTTAA 2799 48.2 MSRQPTFYWIINGWLNTSSATMRNTSYKRLSPNVLSFIIPLYLLVLHFFPIPITGDSPPLYNPTDIYTVDCGASGNLKAWDNRIWIGDTNSRFSLIEKNKASIISKAAKTSPSVDPVPFATARLSRFQFAYIFPVTTGQKFIRLHFYPSSVAGFDRSKAFFSVKIGGYTLLNNFSAALAADAHGDETVSKEFCVNVKQGDQMLNITFTPTASDPDAYAFINGIEIVSMPDYLYYTSPQNGGIQFIGQKNNSFFVETDHALENVYRLNVGGKSLSPTDDTGMFRTWDADDEYCVKLAFVPANTSINLKFTQIPNYTAPLDVYRTARTMGNNKTENMGYNLTWFLPVDSGFSYLLRLHFCEFQPEIQEQHDREFAIIIANQTAENHADVITWSTGNGVPIYKDYGVMMPSQGSNKKQNLYIQLHPNPDSETVYNDAILNGIELFKLSNPEKSLAGPNPDPSEAPAPPPPVQSTSPKRNKTKLIAIAGSVVAGLIALSVIVLFIVWRGRRVRDSEPSDGGSWWGQFSYTSVKSTKTSRSSLPSDLCRHFTLQEVKVATNNFDQVFIIGVGGFGNVYKGYINGGTTPVAIKRLNPESQQGAQEFQTEIEMLSQLRHLHLVSLIGYCNDDREMILVYDYMAHGTLRDHLYKTDNPPLSWKQRLEICIGAARGLHYLHTGVKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKMGPTSMSNAHVSTVVKGSFGYLDPEYYRRQQLTEKSDVYSFGVVLFEVLCARPPLNQTVEKERVSLAQWAPACYRDGKLEQIVDPFLKGKIAPDCLQKFGEIAVSCLQDQGIERPSMSDVVWGLQFAMQLQESAEQEMEKSGSWRKVKDEEAPLKASITDDSDDAYVLTSDSGGTWDSKSSGVMIQSSGEEKSSTSCESDALMSVPKAFFFFLINNSLAFQVGTYC* 933
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23804741 23821929 + Vvi14g1016 Vvi14g1016 776083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1016 932 Gene3D - 259 445 - -
Vvi14g1016 932 Gene3D - 64 228 - -
Vvi14g1016 932 PANTHER OS07G0166700 PROTEIN 50 859 IPR045272 GO:0004714|GO:0006468
Vvi14g1016 932 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 50 859 - -
Vvi14g1016 932 ProSitePatterns Protein kinases ATP-binding region signature. 564 587 IPR017441 GO:0005524
Vvi14g1016 932 Pfam Protein tyrosine and serine/threonine kinase 564 827 IPR001245 GO:0004672|GO:0006468
Vvi14g1016 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Vvi14g1016 932 CDD STKc_IRAK 564 827 - -
Vvi14g1016 932 Pfam Malectin-like domain 69 443 IPR024788 -
Vvi14g1016 932 SUPERFAMILY Protein kinase-like (PK-like) 532 832 IPR011009 -
Vvi14g1016 932 SMART serkin_6 558 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1016 932 Gene3D Transferase(Phosphotransferase) domain 1 635 857 - -
Vvi14g1016 932 ProSiteProfiles Protein kinase domain profile. 558 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1016 932 Gene3D Phosphorylase Kinase; domain 1 521 634 - -
Vvi14g1016 932 MobiDBLite consensus disorder prediction 447 474 - -
Vvi14g1016 932 MobiDBLite consensus disorder prediction 457 471 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76189 PF12819 Malectin_like 6.80E-58 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1016 - - vvi:100241219 1438.71