Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1028 | ATGGACTGTTCTTCTGTGATCAAATGGCGTAGTCTGTGTTTCTTTAGGGTCGTTTTTCTCATCTGGGTCTTGGGGTTTCCTCTAAAAGCTGTCGTGTCTGTTAGCTCAGACAAATCAGTTCTTCTTCAGTTCAAGGACTCGGTCTCCGACCCGTCAGGGCTACTCTCCAGCTGGAAATCCAGCAATTCGGATCACTGTTCGTGGCTCGGCGTCACCTGCGATTCGGGCTCCCGGGTTTTGTCCCTCAACAACTGTACGGGTGGTAATGTGAAACTGATTGGAACATTGTCTCCTGTGATCGCAAAACTTACTGAGCTTAGGGCTTTATCGCTTCCCTACAACGAATTTGGTGGCCAGATTCCCATAGAAATTTGGGGTATGGAGAAGTTGGAGGTTCTTGATCTAGAGGGGAATTCGATGAGTGGATCGTTGCCAATTCGTTTTGGGGGTTTAAGGAATTCGCGGATCTTGAATTTAGCGGGCAACATGGTTAATGGAACAATTCCAGGGTTCATTGGCAGCTTTAAGGAGCTGAGGGGAGATTTGGATTTATCAGGTAATTTATTGGTGGGTGGAATTCCAAGCAGTTTGGGGAACTGTAGTCAGCTGAGGTCAATTCTGTTGTTTTCCAATCTGTTGGAAGAGGTTATTCCAGCTGAACTTGGTCAGCTTCGGAATCTTGAAGTGTTGGATAATATGAAAGGGGACTCTAATTCAGGGCAGTTGGTTTCTGGTAATGATGATTATAATTATTTTCAAGGTACAATTCCGGTGGAGATCACTACCCTTCCAAAGCTCAGGATAATATGGGCGCCTAGGGCAACTCTCGAGGGTAGGTTTCCAAGCAATTGGGGAGCTTGCGACAGCTTGGAGCAAACTGTTTACTCATTTCTCGCTGGTGAAAACAATCTTACTGGACCATTCCCTAGAAATTTGTTTGACAAGTGTTATGGATTGAATCGAGTGGTTGTTAATGTTAGCAACAACAGAATCTCTGGTCAGCTTCCCACAGAAATCGGTGCATTATGCAAAACTCTTACACTTTTGGATGCCTCTGGGAATCAAATTAATGGGTCTATACCCCATAGCATTGGGAATTTGGTGTCTCTTGTTGCTCTTAACTTGAGTTCAAACCATTTACAGGGTGAGATTCCAAGCAGAAGTCCAACAAGAAGTAGAAGCAGTAGTTTCAATTCAATTGAGATAGCATCCATAACATCTGCATCAGCAATTGTTTCAGTTCTTCTAGCTCTTGTTGTCCTCTTCATTTACACGAGAAAATGCAACCCAAAGTCCAGAATTCTGAGATCTGCCAGAAAGGAAGTAACAGTTTTTAATGACATAGGGGTTCCATTGACATTTGAGAACGTTGTGCGGGCAACAGGAAGTTTTAATGCAAGCAACTGCATTGGGAATGGAGGCTTTGGGGCAACATACAAAGCTGAGATCTCACCAGGAGTCTTGGTGGCAATAAAACGGCTTGCAGTTGGACGGTTCCAAGGGGTTCAACAGTTCCATGCCGAAGTCAAAACTCTTGGAAGGCTAGATCATCCCAATCTTGTGACTTTGATAGGTTATCACGCCAGTGAAACAGAGATGTTCCTCATATATAATTATTTGCCTGGTGGTAATTTGGAAAAATTTATCCAGGAGAGGTCTACAAGGGCTGTGGATTGGAGGAAAGCCCTAGATCCTTCGTTTTCATCATATGGGAATGGCTTTAATATTGTTGCTTGGGGCTGCATGCTCCTGCGACAGGGCCGCGCCAAGGAGTTCTTCACTGCAGGTTTATGGGATGCAGGTCCCCACGATGATTTGGTAGAAGTTTTACATTTGGCTGTTGTATGTACTGTTGATTCTCTTTCTACCAGGCCTACAATGAGGCAAGTTGTAAGACGGCTGAAGCAACTGCAACCCCCATCATCCCCCAAGGGTTCTGGTTAA | 1944 | 44.65 | MDCSSVIKWRSLCFFRVVFLIWVLGFPLKAVVSVSSDKSVLLQFKDSVSDPSGLLSSWKSSNSDHCSWLGVTCDSGSRVLSLNNCTGGNVKLIGTLSPVIAKLTELRALSLPYNEFGGQIPIEIWGMEKLEVLDLEGNSMSGSLPIRFGGLRNSRILNLAGNMVNGTIPGFIGSFKELRGDLDLSGNLLVGGIPSSLGNCSQLRSILLFSNLLEEVIPAELGQLRNLEVLDNMKGDSNSGQLVSGNDDYNYFQGTIPVEITTLPKLRIIWAPRATLEGRFPSNWGACDSLEQTVYSFLAGENNLTGPFPRNLFDKCYGLNRVVVNVSNNRISGQLPTEIGALCKTLTLLDASGNQINGSIPHSIGNLVSLVALNLSSNHLQGEIPSRSPTRSRSSSFNSIEIASITSASAIVSVLLALVVLFIYTRKCNPKSRILRSARKEVTVFNDIGVPLTFENVVRATGSFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEVKTLGRLDHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMRQVVRRLKQLQPPSSPKGSG* | 648 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 23993048 | 23996880 | + | Vvi14g1028 | Vvi14g1028 | 776095 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1028 | 647 | ProSiteProfiles | Protein kinase domain profile. | 464 | 647 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1028 | 647 | Pfam | Protein tyrosine and serine/threonine kinase | 467 | 563 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi14g1028 | 647 | SUPERFAMILY | L domain-like | 49 | 393 | - | - | |
Vvi14g1028 | 647 | Gene3D | Ribonuclease Inhibitor | 176 | 238 | IPR032675 | - | |
Vvi14g1028 | 647 | Pfam | Leucine rich repeat N-terminal domain | 35 | 74 | IPR013210 | - | |
Vvi14g1028 | 647 | SUPERFAMILY | Protein kinase-like (PK-like) | 452 | 634 | IPR011009 | - | |
Vvi14g1028 | 647 | Gene3D | Ribonuclease Inhibitor | 33 | 175 | IPR032675 | - | |
Vvi14g1028 | 647 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 316 | 387 | - | - | |
Vvi14g1028 | 647 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 561 | 641 | - | - | |
Vvi14g1028 | 647 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 391 | 561 | - | - | |
Vvi14g1028 | 647 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 16 | 178 | - | - | |
Vvi14g1028 | 647 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 241 | 319 | - | - | |
Vvi14g1028 | 647 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 181 | 240 | - | - | |
Vvi14g1028 | 647 | ProSitePatterns | Protein kinases ATP-binding region signature. | 470 | 492 | IPR017441 | GO:0005524 | |
Vvi14g1028 | 647 | Gene3D | Ribonuclease Inhibitor | 239 | 415 | IPR032675 | - | |
Vvi14g1028 | 647 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 561 | 641 | - | - | |
Vvi14g1028 | 647 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 391 | 561 | - | - | |
Vvi14g1028 | 647 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 316 | 387 | - | - | |
Vvi14g1028 | 647 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 241 | 319 | - | - | |
Vvi14g1028 | 647 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 16 | 178 | - | - | |
Vvi14g1028 | 647 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 | 181 | 240 | - | - | |
Vvi14g1028 | 647 | Gene3D | Phosphorylase Kinase; domain 1 | 426 | 539 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Vvi1g34 | Vvi14g1028 | ECH |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76190 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-12 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1028 | - | - | twl:119991136 | 397.127 |