Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1028 ATGGACTGTTCTTCTGTGATCAAATGGCGTAGTCTGTGTTTCTTTAGGGTCGTTTTTCTCATCTGGGTCTTGGGGTTTCCTCTAAAAGCTGTCGTGTCTGTTAGCTCAGACAAATCAGTTCTTCTTCAGTTCAAGGACTCGGTCTCCGACCCGTCAGGGCTACTCTCCAGCTGGAAATCCAGCAATTCGGATCACTGTTCGTGGCTCGGCGTCACCTGCGATTCGGGCTCCCGGGTTTTGTCCCTCAACAACTGTACGGGTGGTAATGTGAAACTGATTGGAACATTGTCTCCTGTGATCGCAAAACTTACTGAGCTTAGGGCTTTATCGCTTCCCTACAACGAATTTGGTGGCCAGATTCCCATAGAAATTTGGGGTATGGAGAAGTTGGAGGTTCTTGATCTAGAGGGGAATTCGATGAGTGGATCGTTGCCAATTCGTTTTGGGGGTTTAAGGAATTCGCGGATCTTGAATTTAGCGGGCAACATGGTTAATGGAACAATTCCAGGGTTCATTGGCAGCTTTAAGGAGCTGAGGGGAGATTTGGATTTATCAGGTAATTTATTGGTGGGTGGAATTCCAAGCAGTTTGGGGAACTGTAGTCAGCTGAGGTCAATTCTGTTGTTTTCCAATCTGTTGGAAGAGGTTATTCCAGCTGAACTTGGTCAGCTTCGGAATCTTGAAGTGTTGGATAATATGAAAGGGGACTCTAATTCAGGGCAGTTGGTTTCTGGTAATGATGATTATAATTATTTTCAAGGTACAATTCCGGTGGAGATCACTACCCTTCCAAAGCTCAGGATAATATGGGCGCCTAGGGCAACTCTCGAGGGTAGGTTTCCAAGCAATTGGGGAGCTTGCGACAGCTTGGAGCAAACTGTTTACTCATTTCTCGCTGGTGAAAACAATCTTACTGGACCATTCCCTAGAAATTTGTTTGACAAGTGTTATGGATTGAATCGAGTGGTTGTTAATGTTAGCAACAACAGAATCTCTGGTCAGCTTCCCACAGAAATCGGTGCATTATGCAAAACTCTTACACTTTTGGATGCCTCTGGGAATCAAATTAATGGGTCTATACCCCATAGCATTGGGAATTTGGTGTCTCTTGTTGCTCTTAACTTGAGTTCAAACCATTTACAGGGTGAGATTCCAAGCAGAAGTCCAACAAGAAGTAGAAGCAGTAGTTTCAATTCAATTGAGATAGCATCCATAACATCTGCATCAGCAATTGTTTCAGTTCTTCTAGCTCTTGTTGTCCTCTTCATTTACACGAGAAAATGCAACCCAAAGTCCAGAATTCTGAGATCTGCCAGAAAGGAAGTAACAGTTTTTAATGACATAGGGGTTCCATTGACATTTGAGAACGTTGTGCGGGCAACAGGAAGTTTTAATGCAAGCAACTGCATTGGGAATGGAGGCTTTGGGGCAACATACAAAGCTGAGATCTCACCAGGAGTCTTGGTGGCAATAAAACGGCTTGCAGTTGGACGGTTCCAAGGGGTTCAACAGTTCCATGCCGAAGTCAAAACTCTTGGAAGGCTAGATCATCCCAATCTTGTGACTTTGATAGGTTATCACGCCAGTGAAACAGAGATGTTCCTCATATATAATTATTTGCCTGGTGGTAATTTGGAAAAATTTATCCAGGAGAGGTCTACAAGGGCTGTGGATTGGAGGAAAGCCCTAGATCCTTCGTTTTCATCATATGGGAATGGCTTTAATATTGTTGCTTGGGGCTGCATGCTCCTGCGACAGGGCCGCGCCAAGGAGTTCTTCACTGCAGGTTTATGGGATGCAGGTCCCCACGATGATTTGGTAGAAGTTTTACATTTGGCTGTTGTATGTACTGTTGATTCTCTTTCTACCAGGCCTACAATGAGGCAAGTTGTAAGACGGCTGAAGCAACTGCAACCCCCATCATCCCCCAAGGGTTCTGGTTAA 1944 44.65 MDCSSVIKWRSLCFFRVVFLIWVLGFPLKAVVSVSSDKSVLLQFKDSVSDPSGLLSSWKSSNSDHCSWLGVTCDSGSRVLSLNNCTGGNVKLIGTLSPVIAKLTELRALSLPYNEFGGQIPIEIWGMEKLEVLDLEGNSMSGSLPIRFGGLRNSRILNLAGNMVNGTIPGFIGSFKELRGDLDLSGNLLVGGIPSSLGNCSQLRSILLFSNLLEEVIPAELGQLRNLEVLDNMKGDSNSGQLVSGNDDYNYFQGTIPVEITTLPKLRIIWAPRATLEGRFPSNWGACDSLEQTVYSFLAGENNLTGPFPRNLFDKCYGLNRVVVNVSNNRISGQLPTEIGALCKTLTLLDASGNQINGSIPHSIGNLVSLVALNLSSNHLQGEIPSRSPTRSRSSSFNSIEIASITSASAIVSVLLALVVLFIYTRKCNPKSRILRSARKEVTVFNDIGVPLTFENVVRATGSFNASNCIGNGGFGATYKAEISPGVLVAIKRLAVGRFQGVQQFHAEVKTLGRLDHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRKALDPSFSSYGNGFNIVAWGCMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVDSLSTRPTMRQVVRRLKQLQPPSSPKGSG* 648
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 23993048 23996880 + Vvi14g1028 Vvi14g1028 776095
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1028 647 ProSiteProfiles Protein kinase domain profile. 464 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1028 647 Pfam Protein tyrosine and serine/threonine kinase 467 563 IPR001245 GO:0004672|GO:0006468
Vvi14g1028 647 SUPERFAMILY L domain-like 49 393 - -
Vvi14g1028 647 Gene3D Ribonuclease Inhibitor 176 238 IPR032675 -
Vvi14g1028 647 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Vvi14g1028 647 SUPERFAMILY Protein kinase-like (PK-like) 452 634 IPR011009 -
Vvi14g1028 647 Gene3D Ribonuclease Inhibitor 33 175 IPR032675 -
Vvi14g1028 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 316 387 - -
Vvi14g1028 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 561 641 - -
Vvi14g1028 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 391 561 - -
Vvi14g1028 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 16 178 - -
Vvi14g1028 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 241 319 - -
Vvi14g1028 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 181 240 - -
Vvi14g1028 647 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Vvi14g1028 647 Gene3D Ribonuclease Inhibitor 239 415 IPR032675 -
Vvi14g1028 647 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 561 641 - -
Vvi14g1028 647 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 391 561 - -
Vvi14g1028 647 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 316 387 - -
Vvi14g1028 647 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 241 319 - -
Vvi14g1028 647 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 16 178 - -
Vvi14g1028 647 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 181 240 - -
Vvi14g1028 647 Gene3D Phosphorylase Kinase; domain 1 426 539 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Vvi1g34 Vvi14g1028 ECH
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76190 PF07714 PK_Tyr_Ser-Thr 3.00E-12 CL0016 Vvi PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1028 - - twl:119991136 397.127