Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g103 ATGAATTTGCCAAGGAAGAGGGTTCAACTTCTAATCTTCGTCGTCGGCATCGTCGCTCTCAGCATCACTGCTGAAAAATGCCGCCAGCTGCTTGGAGAAGATGGTTCATCCCAGAGTGGGAAGTTTACTTTGTTAAACTGCTTTGACATGAGCTCTGGAACCCTAGCATGCACTGTGAAGGAGGGTGTGAAGCTCTATTTCTACAACATCAGAGCTGTGCATGTTGAAAAAGCACGGCATCATGCAATTGAGGGAGCACTTTCTGATGCATTAACACAAGGACTGAATGCTAAAGATGCAGCTAAACACGCACAGAAAGAAGGAGCAAAAGCAGCGAAGTTGGCAACCCGACAAGCCAAACGTATCATAGGCCCCATTATTTCTTCCGGATGGGACTTTTTTGAAGCTATTTACTATGGTGGTACCTTGACAGAAGGGTTCCTCAGAGGCACTGGAACCTTGTTTGGTGCCTATACTGGTGGATTCCTTGGTGAACAAAGGCTTGGGAGGTTCGGCTATCTTGTGGGAAGCCATTTGGGCAGCTGGGTGGGAGGTAGGATAGGACTGATGATATATGACGTGGCCAATGGAGTCCAGTTCTTGCTTCAATCTGTCCAACCAGAAGAAACTCCCATGGACATGAGCTCTGAAGTTCCCGAAGATCCCGGTTCTTATGAGTCTCCTGCCTATGAAAGCTCTGAAGCACAAGAAGATTCGGAGTCTGAAACCATCCAAAGATGTCAACATGCTGTTCACCCAACTAGTCCGCACTTCACCCTTCTTAGTCAAAACTGCACCCATGTCCCTAGCAAAATCGCCTTTGTGGGCTCAGGGCCCCTGCCCCTCACTTCGATCGTCTTGGCCTCATATCACCTCACTACAACCTCCTTCCACAACTATGACATTGACCCAGCGGCCAATTCAATGGCTGCTCACTTAGTTTCATCCGATCCTGACTTCTCCAAGCGTATGCTCTTCCATACTACTGATATAATGAATGTGACAAATGAGTTGAAAGAGTATGATGTCGTTTACTTGGCAGCTTTGGTTGGTATGGACAAGGAGGAGAAGATCCAGGTGATGGATCATTTGGCTAAGCACATGGCTCCAGGAGCGCTTTTGATGCTGAGGAGTGCTCATGGTGCTCGGGCTTTTCTCTATCCAGTCATTGATCCTTGTGATCTTCGAGGATTTGAGGTTCTTTCCATCTTCCATCCAACAGATGAGGTCATAAATTCAGTTGTTGTCGCGCGTAAATTTCCAATGCATGTACACTCACTTGATCAAGGGCTTGGCCCCATGATACTGCCTAGCAAATGTTCTGAGATCCAAGTCTTCAATCCCCTTGAGGAATTGACGATCGAGGATTCAAGTGTTCTTCAGATTTTTTTCTCTAGTTTTTCTTTGTATCATTGA 1416 46.61 MNLPRKRVQLLIFVVGIVALSITAEKCRQLLGEDGSSQSGKFTLLNCFDMSSGTLACTVKEGVKLYFYNIRAVHVEKARHHAIEGALSDALTQGLNAKDAAKHAQKEGAKAAKLATRQAKRIIGPIISSGWDFFEAIYYGGTLTEGFLRGTGTLFGAYTGGFLGEQRLGRFGYLVGSHLGSWVGGRIGLMIYDVANGVQFLLQSVQPEETPMDMSSEVPEDPGSYESPAYESSEAQEDSESETIQRCQHAVHPTSPHFTLLSQNCTHVPSKIAFVGSGPLPLTSIVLASYHLTTTSFHNYDIDPAANSMAAHLVSSDPDFSKRMLFHTTDIMNVTNELKEYDVVYLAALVGMDKEEKIQVMDHLAKHMAPGALLMLRSAHGARAFLYPVIDPCDLRGFEVLSIFHPTDEVINSVVVARKFPMHVHSLDQGLGPMILPSKCSEIQVFNPLEELTIEDSSVLQIFFSSFSLYH* 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 941772 955196 - Vvi14g103 Vvi14g103 775170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g103 471 PANTHER EXPRESSED PROTEIN 1 239 - -
Vvi14g103 471 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 148 424 IPR004298 GO:0030410|GO:0030418
Vvi14g103 471 MobiDBLite consensus disorder prediction 208 243 - -
Vvi14g103 471 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 282 407 IPR029063 -
Vvi14g103 471 Gene3D Vaccinia Virus protein VP39 255 421 IPR029063 -
Vvi14g103 471 PANTHER EXPRESSED PROTEIN 1 239 - -
Vvi14g103 471 Pfam Nicotianamine synthase protein 258 421 IPR004298 GO:0030410|GO:0030418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g103 - - vvi:100249443 456.447