Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1065 ATGAGCTTCCAAGATCTTCAAAATGGAGCAAAGCCTTCATCTTCCTCCCTCTCTCGAACTTCCCCCTCCCAGGCCGTCGCCGCCGGCATTTTTCAGATCAACACTGCCGTCGCCGGATTTCGTCGACTCGTCGATGCCATCGGAACCTCCAAGGACACTCCTGATCACCGTCAGAAGCTGCATAGTTCGAGGCAAAGGATACTGCAATTGGTAAAGGAGACCTCCGCTAAGCTCAAATCCCTCAGCGAATCCGATCATGCTGCCAATGTCAATCCAAGTAAGAAAGTTGAGGATGCAAAGCTTGCAAGAGATTTTCAAACTACCTTGCAAGAATTCCAGAAAGTTCAACAGCTTGCTGCTGAGCGCGAGTCCACTTATTCGCCTTCTGCTCCATCATCCATACCTCCAGCCTCCAGCTCTGATGAGTACTTGGCACTTAATATGGATCAGGAGAACCAGCCTTTTCTAGTAGGACAGAAGAGGCAAGAGGTACTATTTCTGGGAAATGAAATTGCATTCAATGAGGCCATAATTGAGGAGAGAGAACAGGGAATTAAGGAGATACAAGATCAAATTGGACAGGCAAATGAGATATTTAGGGACCTAGCTGTTCTAGTTCATGAGCAGGGTGTGGTCATTGATGACATTCACTCAAATATCGAGGCCTCCTCTGCCGCAACAACACAAGCTACAGCACAGCTTTCTAAGGCTTCTAAAAGTGTGAAATCTAGATCTTCATGGTGTTGGTGGGTGCTGGCAATTGTCGTGTTGGTGGTGGTCATTCTTCTTATTGTGCTTATCATATAG 807 46.84 MSFQDLQNGAKPSSSSLSRTSPSQAVAAGIFQINTAVAGFRRLVDAIGTSKDTPDHRQKLHSSRQRILQLVKETSAKLKSLSESDHAANVNPSKKVEDAKLARDFQTTLQEFQKVQQLAAERESTYSPSAPSSIPPASSSDEYLALNMDQENQPFLVGQKRQEVLFLGNEIAFNEAIIEEREQGIKEIQDQIGQANEIFRDLAVLVHEQGVVIDDIHSNIEASSAATTQATAQLSKASKSVKSRSSWCWWVLAIVVLVVVILLIVLII* 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24574271 24590308 - Vvi14g1065 Vvi14g1065 776132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1065 268 Gene3D - 171 268 - -
Vvi14g1065 268 MobiDBLite consensus disorder prediction 1 20 - -
Vvi14g1065 268 SMART tSNARE_6 170 237 IPR000727 -
Vvi14g1065 268 Pfam Syntaxin-like protein 27 126 IPR006011 GO:0016020
Vvi14g1065 268 PANTHER SYNTAXIN 14 267 IPR045242 -
Vvi14g1065 268 Gene3D - 12 131 - -
Vvi14g1065 268 PANTHER SYNTAXIN-22-LIKE 14 267 - -
Vvi14g1065 268 CDD SNARE_Qa 178 236 - -
Vvi14g1065 268 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 175 237 IPR000727 -
Vvi14g1065 268 Pfam SNARE domain 212 263 IPR000727 -
Vvi14g1065 268 SUPERFAMILY t-snare proteins 23 230 IPR010989 GO:0016020|GO:0016192
Vvi14g1065 268 SMART SynN_4 11 124 IPR006011 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1065 - K08488 vvi:100254896 432.18