Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1065 | ATGAGCTTCCAAGATCTTCAAAATGGAGCAAAGCCTTCATCTTCCTCCCTCTCTCGAACTTCCCCCTCCCAGGCCGTCGCCGCCGGCATTTTTCAGATCAACACTGCCGTCGCCGGATTTCGTCGACTCGTCGATGCCATCGGAACCTCCAAGGACACTCCTGATCACCGTCAGAAGCTGCATAGTTCGAGGCAAAGGATACTGCAATTGGTAAAGGAGACCTCCGCTAAGCTCAAATCCCTCAGCGAATCCGATCATGCTGCCAATGTCAATCCAAGTAAGAAAGTTGAGGATGCAAAGCTTGCAAGAGATTTTCAAACTACCTTGCAAGAATTCCAGAAAGTTCAACAGCTTGCTGCTGAGCGCGAGTCCACTTATTCGCCTTCTGCTCCATCATCCATACCTCCAGCCTCCAGCTCTGATGAGTACTTGGCACTTAATATGGATCAGGAGAACCAGCCTTTTCTAGTAGGACAGAAGAGGCAAGAGGTACTATTTCTGGGAAATGAAATTGCATTCAATGAGGCCATAATTGAGGAGAGAGAACAGGGAATTAAGGAGATACAAGATCAAATTGGACAGGCAAATGAGATATTTAGGGACCTAGCTGTTCTAGTTCATGAGCAGGGTGTGGTCATTGATGACATTCACTCAAATATCGAGGCCTCCTCTGCCGCAACAACACAAGCTACAGCACAGCTTTCTAAGGCTTCTAAAAGTGTGAAATCTAGATCTTCATGGTGTTGGTGGGTGCTGGCAATTGTCGTGTTGGTGGTGGTCATTCTTCTTATTGTGCTTATCATATAG | 807 | 46.84 | MSFQDLQNGAKPSSSSLSRTSPSQAVAAGIFQINTAVAGFRRLVDAIGTSKDTPDHRQKLHSSRQRILQLVKETSAKLKSLSESDHAANVNPSKKVEDAKLARDFQTTLQEFQKVQQLAAERESTYSPSAPSSIPPASSSDEYLALNMDQENQPFLVGQKRQEVLFLGNEIAFNEAIIEEREQGIKEIQDQIGQANEIFRDLAVLVHEQGVVIDDIHSNIEASSAATTQATAQLSKASKSVKSRSSWCWWVLAIVVLVVVILLIVLII* | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 24574271 | 24590308 | - | Vvi14g1065 | Vvi14g1065 | 776132 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1065 | 268 | Gene3D | - | 171 | 268 | - | - | |
Vvi14g1065 | 268 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Vvi14g1065 | 268 | SMART | tSNARE_6 | 170 | 237 | IPR000727 | - | |
Vvi14g1065 | 268 | Pfam | Syntaxin-like protein | 27 | 126 | IPR006011 | GO:0016020 | |
Vvi14g1065 | 268 | PANTHER | SYNTAXIN | 14 | 267 | IPR045242 | - | |
Vvi14g1065 | 268 | Gene3D | - | 12 | 131 | - | - | |
Vvi14g1065 | 268 | PANTHER | SYNTAXIN-22-LIKE | 14 | 267 | - | - | |
Vvi14g1065 | 268 | CDD | SNARE_Qa | 178 | 236 | - | - | |
Vvi14g1065 | 268 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 175 | 237 | IPR000727 | - | |
Vvi14g1065 | 268 | Pfam | SNARE domain | 212 | 263 | IPR000727 | - | |
Vvi14g1065 | 268 | SUPERFAMILY | t-snare proteins | 23 | 230 | IPR010989 | GO:0016020|GO:0016192 | |
Vvi14g1065 | 268 | SMART | SynN_4 | 11 | 124 | IPR006011 | GO:0016020 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1065 | - | K08488 | vvi:100254896 | 432.18 |