Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1108 ATGGCCGTCACTCCTCTTGACCTCGTCAAATGTAATATGCAGATTGACCCTGCAAAGTACAAGAGCATTTCGTCTGGATTTGGAGTTTTGCTGAAGGAGCAGGGAGTTAGGGGATTTTTCAGGGGTTGGGTGCCTACCCTGCTTGGTTATAGTGCACAGGGTGCTTGCAAGTTTGGATTCTATGAATTCTTCAAGAAGTATTACTCTGACATTGCTGGGCCAGAGTATGCTGCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTAATTGCAGATGTTGCTCTTTGCCCCATGGAGGCAGTGAAGGTCCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTGTCAGATGGATTTCCCAAGTTTGTTAAATCCGAAGGTGCCTTGGGATTGTACAAGGGCATTGTTCCTCTCTGGGGACGTCAGATTCCATATACAATGATGAAATTTGCTTCTTTTGAGACTATTGTTGAGATGCTTTACAAGTATGCCATTCCTACTCCGAAGGACCAGTGCAGTAAAACTCTGCAGCTTGGTGTGAGCTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTTTCTCATCCAGCTGACAATCTTGTCTCCTTCCTCAACAATGCTAAGGGCGCAACAGTTGGTGATGCTGTGAAGAACCTTGGATTGTGGGGTCTCTTCACCCGGGGGCTTCCCCTGCGTATTGTCATGATTGGAACTCTCACCGGAGCACAGTGGGGGCTATATGATGCTTTCAAAGTTTTCGTAGGACTGCCAACCACTGGTGGTATTGCTCCTGCTCCTCCTGCTCCAACGACTTCTGAGCTTGCAAAGGCCTAG 855 47.95 MAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGFPKFVKSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKDQCSKTLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGIAPAPPAPTTSELAKA* 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25017541 25022580 + Vvi14g1108 Vvi14g1108 776175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1108 284 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 277 IPR044677 GO:0005315|GO:1990547
Vvi14g1108 284 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 260 IPR018108 -
Vvi14g1108 284 Pfam Mitochondrial carrier protein 84 168 IPR018108 -
Vvi14g1108 284 Pfam Mitochondrial carrier protein 2 69 IPR018108 -
Vvi14g1108 284 Gene3D Mitochondrial carrier domain 1 76 IPR023395 -
Vvi14g1108 284 Gene3D Mitochondrial carrier domain 77 262 IPR023395 -
Vvi14g1108 284 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 277 - -
Vvi14g1108 284 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 164 IPR018108 -
Vvi14g1108 284 SUPERFAMILY Mitochondrial carrier 2 256 IPR023395 -
Vvi14g1108 284 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 67 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1108 Vvi17g35 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1108 K15102 - vvi:100253246 558.525