Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1109 ATGGCTACCAGATACTGGTCGGTGTCTCTTCCAGTTCGAACCTCCGCTTCTTCACTATGGAATCGTTTACAGGACGCCATTTCTAAGCATTCCTTCGACACTCCTCTCTACAGGTTCAATATCCCTAATCTCCGTGTAGGAACCCTAGATTCCCTATTATCCCTCAGCGATGACCTTCAGAAGTCAAACAGCTTCGTCGAAGGAGTGACGCACAAGATCAGGCGCCAGATCGAGGATTTAGAGAAGGCATCGGGCGTGGAGACAAGTGCACTTACGGTGGATGGAGTACCAGTTGATTCCTACCTCACCAGATTTGTTTGGGACGAAGCCAAGTTTCCCACGATGTCACCTCTGAGGGAGATCGTGGATAGTATTCATCATCAAGTATCAAAGATCGAGGATGATCTTAAGGTTCGCATTGCTGAGTATAATAATGTGCGCAGTCAGCTCAATGCTATTAATCGAAAGCAAAGTGGAAGCCTAGCTGTTCGTGATCTTTCCAACCTAGTAAAGCCAGAGGACATTATTGCCTCAGAACATTTAGTGACACTTCTTGCAATTGTTCCCAAGTATTCTCAGAAGGACTGGTTGTCAACTTATGAAACATTGACTAGCTATGTGGTCCCCAGGTCATCCAAGAAGCTGCATGAAGACAATGAGTATGCTCTATACACTGTAACCCTGTTTCACCGTGTTGCTGACAATTTTAGAACAAATGCACGTGAAAGAGGATTTCAAATTCGTGATTTTGAATATAGTTCAGAAGCACAGGAAAGTAGGAAGGAAGAGTTGGAAAAATTGATGCGAGACCAGGAAACATTTAGGAGCACTCTTTTGCAATGGTGCTATACCAGTTATGGGGAGGTTTTCAGCTCCTGGATGCATTTTTGTGCTGTACGTGTCTTTGCAGAGAGTATCCTTAGATATGGCTTGCCACCATCCTTCTTGGCATGTGTGTTAGCTCCATCCGTTAAAAGTGAGAAGAAAGTGCGATCAATTCTTGAAGGGCTATGTGACAGCACAAACAGCGCATTTTGGAAATCTGAGGATGACGCAGGAGGGATGGCTGGTCTAGGAGGTGACGCTGATGCCCACCCATATGTCTGCTTCACAATTAATCTTGTTTGA 1128 44.95 MATRYWSVSLPVRTSASSLWNRLQDAISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLQKSNSFVEGVTHKIRRQIEDLEKASGVETSALTVDGVPVDSYLTRFVWDEAKFPTMSPLREIVDSIHHQVSKIEDDLKVRIAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIASEHLVTLLAIVPKYSQKDWLSTYETLTSYVVPRSSKKLHEDNEYALYTVTLFHRVADNFRTNARERGFQIRDFEYSSEAQESRKEELEKLMRDQETFRSTLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPSVKSEKKVRSILEGLCDSTNSAFWKSEDDAGGMAGLGGDADAHPYVCFTINLV* 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25023671 25028122 - Vvi14g1109 Vvi14g1109 776176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1109 375 SUPERFAMILY Vacuolar ATP synthase subunit C 1 374 IPR036132 GO:0015078|GO:0033180|GO:1902600
Vvi14g1109 375 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 374 - -
Vvi14g1109 375 Gene3D - 41 312 - -
Vvi14g1109 375 Pfam V-ATPase subunit C 5 368 IPR004907 GO:0033180|GO:0046961|GO:1902600
Vvi14g1109 375 CDD V-ATPase_C 5 372 IPR004907 GO:0033180|GO:0046961|GO:1902600
Vvi14g1109 375 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 374 IPR004907 GO:0033180|GO:0046961|GO:1902600
Vvi14g1109 375 Gene3D Vacuolar atp synthase subunit c; domain 1 8 334 - -
Vvi14g1109 375 Gene3D - 163 251 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1109 Vvi17g38 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1109 K02148 - vvi:100267004 727.243