Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1132 ATGGAGTATTGTCGCTGCTTTGGTTTTAGGAAGGGGAGGAAATACCGAGGCAGCGACAGTATGCAAAAATTACAGCCATCCAGGACCTCCACCGACCCTGAACTGCCTTCAGGATCAAAACCAGAAGCATCAGTTGCAACAGATGGGGTTGCGGGTAACAAGACTCGTACATTCACATTCCGAGAACTTGCAACTGCAACAAACAATTTTAGGCAAGAGTCCCTTATAGGAGAAGGTGGATTTGGGACTGTTTATAAAGGGAAAATTGAAGGACTGGATCAGGTTGTAGCTGTTAAAATGCTAAATAAGAGTGGGCTCCAAGGGAATAAGGAATTTTTGGTAGAAGTTCTGATGCTTTCTCTCCTGTGCCACCCAAACCTTGTCAATATGATAGGTTACTGTGCTGAAGGGGACCAGCGCCTTCTCGTCTATGAATTCTTGCCTTTAGGATCCTTGGAACGTCACCTCCATGATCTTCCCCCGGATAAGGAGCCATTGGATTGGAACACAAGGATGAAGATAGCATGTGGTGCAGCCAAAGGATTGAGCTACCTACACCATGAAGCGCAGCCTCCTGTCATATACAGAGACCTAAAATCATCTAACATTTTGTTGGATGAGGGTTTCTATCCAAAACTGTCTGATTTTGGGTTCGCTAAGTTCGGTCCAGTTGAAGATAAGTCCCATGTCTCGACCAGGGTGATGGGCACCCATGGTTACTGTGCTCCTGAGTATGCCACAACGGGGAAACTAACAATCAAGTCTGACACATATAGTTTTGGGGTAGTTTTATTGGAGCTGATCACTGGACAATTTGCAATAGATCCCACCCGTGGCCATGGAAAAAAGATGCTTGTTGATAGGGTACTCCCCATATTAAAAGACCCCAAGAACTATCCCCGGTTGGCAGATCCACGGCTGAAGGGCCAGTTCCCAGAGTCTGCTCTACACCACGCTATAGAGCTGGCATCCATGTGTGTCCGGGAAAATGCTAATGCCCGTCCCCTAATGAAAGAAGTGGTGCTTGCTTTGGATTACTTGGTGGCCCATCCCTATGATCCCAACGCAGACAAGGATTCGAGGAAGAGAGGAGTAAGGACATCTGAGAATGGGGCAGATTTGAAAGGCCCTGAGAAGGAGACAATAGAAGTGGGGAAGAAGTTGAACAGCACCATAGATCGGGAGCAAGCAGTTGCAGAGGCCAAGAAGTGGGGGGAGAGTTGGAGAGACATGAAAGAAAAAGGGCAGAGTAGTAGTTGTAATAGCTAA 1269 47.04 MEYCRCFGFRKGRKYRGSDSMQKLQPSRTSTDPELPSGSKPEASVATDGVAGNKTRTFTFRELATATNNFRQESLIGEGGFGTVYKGKIEGLDQVVAVKMLNKSGLQGNKEFLVEVLMLSLLCHPNLVNMIGYCAEGDQRLLVYEFLPLGSLERHLHDLPPDKEPLDWNTRMKIACGAAKGLSYLHHEAQPPVIYRDLKSSNILLDEGFYPKLSDFGFAKFGPVEDKSHVSTRVMGTHGYCAPEYATTGKLTIKSDTYSFGVVLLELITGQFAIDPTRGHGKKMLVDRVLPILKDPKNYPRLADPRLKGQFPESALHHAIELASMCVRENANARPLMKEVVLALDYLVAHPYDPNADKDSRKRGVRTSENGADLKGPEKETIEVGKKLNSTIDREQAVAEAKKWGESWRDMKEKGQSSSCNS* 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25246233 25251029 - Vvi14g1132 Vvi14g1132 776199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1132 422 SUPERFAMILY Protein kinase-like (PK-like) 56 354 IPR011009 -
Vvi14g1132 422 SMART serkin_6 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1132 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Vvi14g1132 422 MobiDBLite consensus disorder prediction 17 48 - -
Vvi14g1132 422 MobiDBLite consensus disorder prediction 355 422 - -
Vvi14g1132 422 Gene3D Phosphorylase Kinase; domain 1 38 146 - -
Vvi14g1132 422 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Vvi14g1132 422 Pfam Protein kinase domain 71 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1132 422 CDD STKc_IRAK 76 341 - -
Vvi14g1132 422 PANTHER OS07G0668900 PROTEIN 32 371 - -
Vvi14g1132 422 MobiDBLite consensus disorder prediction 20 37 - -
Vvi14g1132 422 MobiDBLite consensus disorder prediction 355 390 - -
Vvi14g1132 422 ProSiteProfiles Protein kinase domain profile. 70 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1132 422 Gene3D Transferase(Phosphotransferase) domain 1 147 367 - -
Vvi14g1132 422 MobiDBLite consensus disorder prediction 396 413 - -
Vvi14g1132 422 PANTHER OS07G0668900 PROTEIN 32 371 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1315 Vvi14g1132 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76192 PF00069 Pkinase 5.50E-46 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1132 K13430 - vvi:100259977 854.358