Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1147 ATGGAGAATTATCAGAACTTCTTCGCTTGCTCGTCATCGGCGCCGCCACCAGCTTCGATGGGTTTTACATCAAACATGGAGAGTTCCAATGTTTTCGGTAATGTCCATGGTCACAGTATTCCAAATGGGTTCTTGGGGTTGAAGTCCACGGAGATCCATGTCCCTACAGGACAAGAAGTCGAGAACATTTCTAGGAGCAGTGGAGGCTTTGGTAGGTCTGAGAATGAGGTGAAATCTTGTAAGAAGAAGTATGAGAAGAAGATCAGGAAGCCCAGATATGCTTTTCAAACCAGGAGCCAGGTTGATATACTTGATGATGGATATAGATGGAGGAAGTACGGTCAAAAGGCAGTTAAGAACAACAAATTTCCAAGAAGCTACTACAGATGTACCCATCAGGGATGCAATGTAAAGAAGCAGGTGCAACGCCTATCCAAAGATGAAAGCATTGTGGTGACTACTTATGAAGGGGTGCACACACATCCAATCGAGAAGCCCACCGACAATTTCGAACATATCTTGAATCAGATGCAAATCTACGCTCCCTAA 549 44.44 MENYQNFFACSSSAPPPASMGFTSNMESSNVFGNVHGHSIPNGFLGLKSTEIHVPTGQEVENISRSSGGFGRSENEVKSCKKKYEKKIRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSKDESIVVTTYEGVHTHPIEKPTDNFEHILNQMQIYAP* 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25479102 25481683 + Vvi14g1147 Vvi14g1147 776214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1147 182 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi14g1147 182 Gene3D WRKY domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi14g1147 182 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi14g1147 182 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi14g1147 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 179 IPR044810 GO:0003700
Vvi14g1147 182 SUPERFAMILY WRKY DNA-binding domain 96 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi14g1147 182 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 3 179 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1275 Vvi14g1147 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13949 PF03106 WRKY 3.10E-27 CL0274 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1147 - - vvi:100263502 357.066