Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1160 ATGGAGGTGGTTATGGAAGAAAGCCAATTAGGGTTTCCGTACTGGAGCTCAGTTCGACGGAGATTCGGCCCAGAATCTCCTTTCTTTACTTCCGGAAACATTGAGAGAGAACTTCTCGCCAAACAGGTTGCATTGGACTTAACTGAAGATGAAAAGCAACATCTTCAGAATTTGGAAGATGAAGAAGGCAGGGGCTTATTTTGTCCAATTGTTGGTTGTGGGGCACGCTTGACTTCTTTGGAAGGCTTTGAAGATCACTATAATGCACGACATACTGCATCTTGCTCGGTTTGCTCAAGAGTTTACCCAACATCCCGCCTGCTCAGCATACATGTGTCAGAAGCACATGATTCTTTCTTTCAGGCAAAAGTTGCTCGTGGTTATGCAATGTATGAATGCTTGGTCGAAGGCTGTGGTATGAAGCTTAAGAGCTATAAAAGTCGTCAGCAGCATCTGGTGGACAAACATAAATTCCCCACTTCCTTTGAGTTCTTTAAGAAGGGCCAGCCATCCAAGAAACGGAGGCAGAAACTCCAACGTAAACAAGCTGTTCACAAGAGGGAGGAGGCTTCAAGCACCATGGAAATAGAAGAAGAAACTATTAGTGGCCTTGTTTCAGCAGTCTCAAAATTAAGCACTTCAGACTCAACTCCTTCCTCTGTCAGCTTTGGCCGTCACCACACTCGTGGCTTCACATTTGTCCCTCGTGCTGTTCAGAATGAAAAAAGGCCAGACTCCACACAAGCAATTACTAAGAGATAG 762 45.01 MEVVMEESQLGFPYWSSVRRRFGPESPFFTSGNIERELLAKQVALDLTEDEKQHLQNLEDEEGRGLFCPIVGCGARLTSLEGFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMYECLVEGCGMKLKSYKSRQQHLVDKHKFPTSFEFFKKGQPSKKRRQKLQRKQAVHKREEASSTMEIEEETISGLVSAVSKLSTSDSTPSSVSFGRHHTRGFTFVPRAVQNEKRPDSTQAITKR* 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 25599333 25604371 + Vvi14g1160 Vvi14g1160 776227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1160 253 MobiDBLite consensus disorder prediction 168 193 - -
Vvi14g1160 253 MobiDBLite consensus disorder prediction 213 253 - -
Vvi14g1160 253 PANTHER UNCHARACTERIZED 7 242 IPR039258 -
Vvi14g1160 253 ProSitePatterns Zinc finger C2H2 type domain signature. 95 116 IPR013087 -
Vvi14g1160 253 PANTHER ZINC FINGER PROTEIN 511 7 242 - -
Vvi14g1160 253 SMART c2h2final6 131 156 IPR013087 -
Vvi14g1160 253 SMART c2h2final6 93 116 IPR013087 -
Vvi14g1160 253 SMART c2h2final6 66 91 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13952 None None None None Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1160 - - vvi:100249687 489.96