Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g119 ATGGCTCAATCATCCAATAATGCTGTTGGAGTTGATAACACTTTTAGGAGGAAATTTGATAAAGAAGAGTACTTAGAACGAGCTAGGAAGCGTGAACAGGAGGAGGAGGAGGGGGGGAGGCATAAATCCAAGTCCAAAGGTCCTCCGGTGCAAAGGAAACCCTTGAAGCACAGAGATTATGAAGTAGACCTTGAATCCCGTTTGGGAAAAACCCAGGTTGTTACTCCAATAGCACCTCTCAGCCAGCAGGCTGGATACTACTGTTCAGTTTGTGAATGTGTAGTAAAGGATTCTGCAAACTACTTGGACCATATCAATGGAAAGAAACATCAAAGAGCTTTGGGAATGTCTATGCGAGTAGAACGGGCTTCTCTTCAACAGGTCCAGGAGCGATTTGAAGTTCTCAAGAAGCGGCGAACACCTGGTAGCTTTACCGAGCAAGATCTTGATGAGCGGATCTTAAAACAGCAGCAAGAAGAGGAGGAACGGAAACGTCAGCGTCGAGAGAGAAAGAAAGAGAAAAAGAAAGAGAAGGCAGTAGAAGAGGAACCCGAGCTAGACCCTGATGTTGCAGCCATGATGGGATTTGGGGGGTTCCGATCATCCAAGAAGTGA 615 46.18 MAQSSNNAVGVDNTFRRKFDKEEYLERARKREQEEEEGGRHKSKSKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQERFEVLKKRRTPGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKEKAVEEEPELDPDVAAMMGFGGFRSSKK* 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1070764 1076734 - Vvi14g119 Vvi14g119 775186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g119 204 Coils Coil 151 183 - -
Vvi14g119 204 Gene3D Classic Zinc Finger 81 118 - -
Vvi14g119 204 SUPERFAMILY beta-beta-alpha zinc fingers 82 123 IPR036236 -
Vvi14g119 204 MobiDBLite consensus disorder prediction 22 44 - -
Vvi14g119 204 MobiDBLite consensus disorder prediction 143 204 - -
Vvi14g119 204 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 204 IPR040107 GO:0000398|GO:0005681
Vvi14g119 204 MobiDBLite consensus disorder prediction 143 167 - -
Vvi14g119 204 Pfam Zinc-finger of C2H2 type 86 110 - -
Vvi14g119 204 SMART ZnF_U1_5 83 117 IPR003604 GO:0003676|GO:0008270
Vvi14g119 204 MobiDBLite consensus disorder prediction 22 58 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g119 K12848 - vvi:100263190 340.502