Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1200 ATGGCATTTCTGCAATTACCACCACAAAGCCTTGGACATTCACGGGAGGCACCACCACTAAGAAAGCCAATGGAGGAAGCAGGCTTTCTCTTGGTACTTTTCATGGGGCTGTTGAACTTGGTTTTTTTGGCTTTTCTTTTTTGGGTTTTCTTTATTTCTCACACCCATCAAATGCAAAGCTCTCAAACTCAAGCGCTACTGCAGCTAAGGAAACATTTGGAATACCCTCTGGCACTGGAAATTTGGGAGAATTACAGTGGAGACTTCTGTAACCTGGCTTCAACCCCACACATGGCCATCACATGCCAAGACAATTCTGTCAGTGAGCTCAAAATTATGGGAGATAAGCATGTTAAGGTTAGTGATTTCAGCGGATTTGCAGTTCCTAATGAGACTCTGTCTGACGGTTTCTCTATTGATTCTTTTGTTACAACATTGTCGAGGTTATCGGGCTTAAGGGTTCTTAGTCTAGTGTCTTTGGGGATTTGGGGACCACTTCCTGATAAAATCCATAGGTTGGCTTTACTTGAAGTATTGGATTTGAGCTCAAATTTTATGTTTGGTTCCATTCCACCGAAGGTATCTACCTTGGTGAAACTCCAAACCCTCACATTGGATGCTAATTTCTTCAATGACAGTGTCCCCGATTGGATGGATTCGTTGTCCAATCTCTCTAGTTTGAGCTTGAGGAATAACCGGTTTAAGGGTCAGTTTCCTCCTTCTATATCCAGAATTGCAACACTCACGGATGTTGCTCTTTATTTGAATTTAGCGTCCAATATGCTGAGTGGATCACTTCCTGACGGTCTAAGTTGTGGAGATGAACTTGGGTTTGTTGACATTTCTTCAAACAAGTTAATGGGCGTACTTCCTTCTTGCTTGAGCATTGCTTCAGATAGGAGAGTTGTTAAGTTTGGTGGAAATTGCTTTTCTATAGATGCTCAACACCAGCATCAAGAATCATACTGCAAAGCTGCCCATATAAAGGGAAAACAATCCAAGGGAAAAGAAATAGGAGTATTACTTGGTGCCATAGCAGGAGCTGTTATCATCGTGGCCTTTCTAGCATTTGTATTATTCATTTTATGTAGAAGGTGTAGAAAATACCCTTCAAGAGGGTCATTTGAGCAGCCTGCAATGCCAAAATTGGCACAAGAGAACTCTTCCACAGGGATTTCACCAGAGCTCCTTGCAAATGCTAGATTCATTTCTCAAGCAGCAAAGCTTGGGACACAAGGTTCCCCAACATATCGATTATTTTCCTTAGAGGAGTTAAAGGATGCCACAAATAATTTTGATCCAATGACATTTCTTGGTGAAGGATCTATTGGCAAGCTTTACAAGGGAAAGTTAGAAAATGGAGCATATGTTGGCATACGAACTATAACTTTGTATAGGAAATATTCAATTCGAAACCTTAAACTTCGCCTGGATTTGCTTTCAAAACTTCGTCATCCACATTTGGTTTCCCTATTGGGTCATTGCATTGATGGCGGTGGACAAGATGATTCCAATGTTGATAGATTCTTTCTTATATATGAATACATGCCCAATGGGAATTATCATACTCATCTCTCAGAAAATTGTCCGGCTAAGGTTCTTAAGTGGTCAGATAGATTGGCGGTTCTAATTGGTGTGGCAAAGGCTGTTCACTTTCTTCATACTGGAGTGATTCCAGGTTCTTTTAACAACCGACTGAAAACAAATAATATATTGCTAGACGAGCATAGGATAGCAAAGTTGAGTGACTATGGGATGTCCATCATTATGGAAGAGAATGAAAAAGTTGATGCAAAGAAGGAAGGAGGCAAACCATGGCAAAGGAAACAATTAGAGGATGATGTTTATAATTTCGGATTTATCTTGCTTGAATCACTCGTGGGCCCTATAGTAACTGGAAAAGGAGAGACGTTTCTGCTTAATGAAATGGCATCCTTTGGGAGTCAAGACGGTCGGAAGCGAATCGTGGATCCAATTGTACTAACCACATCCTCACAAGAATCATTATCAATTGTGGTATCAATCACAAGCAAATGTGTCTCTCCTGAACCATCTACCCGTCCCTCATTTGAGGATGTACTTTGGAACCTGCAGTATGCAGCTCAAGTCCAGGCCACAGCTGATGCTGATCAAAAATCTGATGGAGCATCCCAAACATAA 2160 41.11 MAFLQLPPQSLGHSREAPPLRKPMEEAGFLLVLFMGLLNLVFLAFLFWVFFISHTHQMQSSQTQALLQLRKHLEYPLALEIWENYSGDFCNLASTPHMAITCQDNSVSELKIMGDKHVKVSDFSGFAVPNETLSDGFSIDSFVTTLSRLSGLRVLSLVSLGIWGPLPDKIHRLALLEVLDLSSNFMFGSIPPKVSTLVKLQTLTLDANFFNDSVPDWMDSLSNLSSLSLRNNRFKGQFPPSISRIATLTDVALYLNLASNMLSGSLPDGLSCGDELGFVDISSNKLMGVLPSCLSIASDRRVVKFGGNCFSIDAQHQHQESYCKAAHIKGKQSKGKEIGVLLGAIAGAVIIVAFLAFVLFILCRRCRKYPSRGSFEQPAMPKLAQENSSTGISPELLANARFISQAAKLGTQGSPTYRLFSLEELKDATNNFDPMTFLGEGSIGKLYKGKLENGAYVGIRTITLYRKYSIRNLKLRLDLLSKLRHPHLVSLLGHCIDGGGQDDSNVDRFFLIYEYMPNGNYHTHLSENCPAKVLKWSDRLAVLIGVAKAVHFLHTGVIPGSFNNRLKTNNILLDEHRIAKLSDYGMSIIMEENEKVDAKKEGGKPWQRKQLEDDVYNFGFILLESLVGPIVTGKGETFLLNEMASFGSQDGRKRIVDPIVLTTSSQESLSIVVSITSKCVSPEPSTRPSFEDVLWNLQYAAQVQATADADQKSDGASQT* 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26032900 26038531 - Vvi14g1200 Vvi14g1200 776267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1200 719 Pfam Protein tyrosine and serine/threonine kinase 437 694 IPR001245 GO:0004672|GO:0006468
Vvi14g1200 719 SUPERFAMILY L domain-like 146 299 - -
Vvi14g1200 719 Pfam Leucine rich repeat 176 234 IPR001611 GO:0005515
Vvi14g1200 719 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 254 717 - -
Vvi14g1200 719 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 38 253 - -
Vvi14g1200 719 Gene3D Phosphorylase Kinase; domain 1 398 515 - -
Vvi14g1200 719 ProSiteProfiles Protein kinase domain profile. 432 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1200 719 SUPERFAMILY Protein kinase-like (PK-like) 414 697 IPR011009 -
Vvi14g1200 719 Gene3D Ribonuclease Inhibitor 59 332 IPR032675 -
Vvi14g1200 719 Gene3D Transferase(Phosphotransferase) domain 1 516 718 - -
Vvi14g1200 719 PANTHER OS07G0166700 PROTEIN 254 717 IPR045272 GO:0004714|GO:0006468
Vvi14g1200 719 PANTHER OS07G0166700 PROTEIN 38 253 IPR045272 GO:0004714|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1200 Vvi17g141 ECH
Vvi1g1117 Vvi14g1200 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76194 PF07714 PK_Tyr_Ser-Thr 2.80E-19 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1200 - - vvi:100261231 914.835