Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1211 ATGGAGAAATCGAACCTTCACATCGATCCTAAGAGCGGTTTCTGCTCGGCTACCAAGACCTTCCATAGCCTCAAACCCACCGTTGAGCTCCCACCTCAACATCTCCTTCTCTCCGCCGATGCATATGCTTTTTCTCTCCGATCCGGTTTGGGTTGCCCTGACTCGGCCGCTCTCATCAACTCAACCACCGGTCACCGCCTCTTATATTCTGAATTCGCCCTCCGCTCCAAGACCTTGGCCGCTTATCTCCAAACAGTCATCGGGCTCTCCAAAGGCGATACTGCGTTTGTACTCTCTTCCAATCTCATTCAGGTTCCGATTCTATACTTCTCTCTGCTCTCACTCGGCGTAATCATCTCTCCTGCCAATCCAATCAACACCCAATCCGAAATTTCCCGTCTAATAGAGCTGTGCAAGCCCGTGATTGCCTTTTCCATCTCAACTGCTGCTCACAAGCTTCCCAGCCTCCATCACAGAACCGTTATCATCGACTCGTTCGAGTTCGACTCAATGATGACAGGTCCAATCCGTGAACTCGTCCCCGTGGAGGTGAGTCAATCAGATCTGGCGGCGATAATGTATTCGTCGGGGACGACCGGGAGAGTCAAGGGAGTGATGTTGACTCACCGGAATCTGATTGCGATGACCGCGAGCATCCACGAGGGGCAATCTGTGAGGAGTTCGCCGGATGTACTGTTTGACTTAAGAAGAATGCTCACGTTGGTGGAGAAATTTAAGGTGACTCACATGGCGGTGGTTCCGCCGGTGTTGGTGGCGATGGCCAAAGGAGATGCAACGGACAACAACGACTTAACGTCGTTGGAGAGCGTGTCGTGCGGCGGAGCCCCGCTTGGGAAGGACTTGTGCCAAGCATTCACTGCCAAGTTCCCCAATGTTGCTATACGGCAGGGTTATGGGCTGACTGAATCATCGGGGGCAGTTTCCCGACTACTGGATCCTGAAGAATGTCGTCATTGGGGCTCAGTAGGAAGGCTTACAGGGATTTTTGAAGCAAAAATCGTGGACCCAGACACGGGCCTTGCGCTGCCTCCCTGCAAACAAGGAGAACTTTGGGTTAGAGGACCTGCAGTTATGAAAGGCTATGTTGGGGACCGAAAGGCAACTCGGGAAACTTTGGTTTCAGATGGGTGGTTGAGGACAGGTGATCTTTGTTATATTGATGGGGAAGGTTTCCTTTATGTTGTAGATAGACTCAAGGAACTTATCAAATACAAAGGATACCAAGTTGCCCCTGCGGAGCTGGAACACTTGCTCCAATCCCATCCTGAGATTGTTGATGCTGCTGTGATACCATACCCTGATGAAGAAGCTGGTGAAGTCCCTATGGCCTATGTAGTAAGACGGCCCCAGAGCAGCCTGAATGAAGCACAAGTGATGGATTTTATTGCAAAACAGGTTGCAGCATACAAGAAAATAAGACGTGTATTGTTTGTGAGTTCCATACCCAAGAGTCCGGCTGGGAAAATACTGAGGAAGGAGTTGCGGAAGCTGGCTGTCCCTGGGTCTCTGTCTAAATTGTAA 1542 50.71 MEKSNLHIDPKSGFCSATKTFHSLKPTVELPPQHLLLSADAYAFSLRSGLGCPDSAALINSTTGHRLLYSEFALRSKTLAAYLQTVIGLSKGDTAFVLSSNLIQVPILYFSLLSLGVIISPANPINTQSEISRLIELCKPVIAFSISTAAHKLPSLHHRTVIIDSFEFDSMMTGPIRELVPVEVSQSDLAAIMYSSGTTGRVKGVMLTHRNLIAMTASIHEGQSVRSSPDVLFDLRRMLTLVEKFKVTHMAVVPPVLVAMAKGDATDNNDLTSLESVSCGGAPLGKDLCQAFTAKFPNVAIRQGYGLTESSGAVSRLLDPEECRHWGSVGRLTGIFEAKIVDPDTGLALPPCKQGELWVRGPAVMKGYVGDRKATRETLVSDGWLRTGDLCYIDGEGFLYVVDRLKELIKYKGYQVAPAELEHLLQSHPEIVDAAVIPYPDEEAGEVPMAYVVRRPQSSLNEAQVMDFIAKQVAAYKKIRRVLFVSSIPKSPAGKILRKELRKLAVPGSLSKL* 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26130485 26133065 - Vvi14g1211 Vvi14g1211 776278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1211 513 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 233 508 - -
Vvi14g1211 513 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 233 - -
Vvi14g1211 513 Gene3D - 405 506 IPR045851 -
Vvi14g1211 513 Gene3D - 27 231 IPR042099 -
Vvi14g1211 513 Pfam AMP-binding enzyme 223 411 IPR000873 -
Vvi14g1211 513 Pfam AMP-binding enzyme 53 220 IPR000873 -
Vvi14g1211 513 SUPERFAMILY Acetyl-CoA synthetase-like 52 506 - -
Vvi14g1211 513 Gene3D Luciferase; Domain 3 330 404 - -
Vvi14g1211 513 Gene3D - 232 317 - -
Vvi14g1211 513 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 233 508 - -
Vvi14g1211 513 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 9 233 - -
Vvi14g1211 513 Pfam AMP-binding enzyme C-terminal domain 420 495 IPR025110 -
Vvi14g1211 513 ProSitePatterns Putative AMP-binding domain signature. 192 203 IPR020845 -
Vvi14g1211 513 CDD 4CL 31 501 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1211 - - vvi:100242222 985.711