Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1214 ATGGCTGGAGGAAGGGCAATCCACCAGTTACTGAGGATGAAACTTCGATCACAATCCACTGCCTCTCCAGCTTTGTCATCCCTTCTTGCAAAGAAAGATCAAGAAGGAGTTGGATCAGCTGGTTCAAAGTCCCTTAGAGCACTTGCACTCCTTGGGGCAGGTGTTTCAGGGCTTTTGAGTTTTGCAACAATAGCATCTGCTGATGAGGCTGAGCATGGATTAGAATGTGCAAACTATCCCTGGCCTCACTCAGGCATTCTCAGTTCATATGACCATGCTTCGATTCGTCGTGGTCACCAGGTTTACCAACAAGTCTGTGCATCCTGCCATTCTATGTCACTAATTTCATATCGTGATTTAGTGGGTGTGGCATATACAGAAGAGGAGACAAAGGCTATGGCTGCTGAGATTGAGGTGGCTGATGGGCCTAATGACGAGGGTGAGATGTTTACACGTCCTGGTAAACTCAGTGATCGTTTTCCTCAGCCATATGCAAATGAACAAGCTGCTCGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGCCTTATCACCAAAGCTCGCCACAATGGTCAAAACTATGTATTTGCACTGCTAACTGGTTACCGTGATCCACCTGCTGGCATTTCGATCCGAGAAGGGTTGCACTACAATCCTTACTTCCCTGGGGGTGCAATTGCTATGCCTAAAATGCTCATTGATGGTGCACTTGAGTATGAAGATGGTACGCCTGCAACAGAGGCTCAGATGGGGAAAGATGTTGTATCATTTTTGACATGGGCAGCGGAACCAGAGATGGAAGAAAGGAAACTGATGGGGTTCAAATGGATATTTTTACTTTCACTGGCACTACTTCAAGCTGCTTATTTCAGGCGATTGAGGTGGTCTGTCTACAAGTCTCGTAAGCTGATTGTTGACGTTGTCAACTAA 933 46.3 MAGGRAIHQLLRMKLRSQSTASPALSSLLAKKDQEGVGSAGSKSLRALALLGAGVSGLLSFATIASADEAEHGLECANYPWPHSGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVADGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFLLSLALLQAAYFRRLRWSVYKSRKLIVDVVN* 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26151737 26165522 + Vvi14g1214 Vvi14g1214 776281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1214 310 PRINTS Cytochrome C1 signature 79 98 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PRINTS Cytochrome C1 signature 99 118 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PRINTS Cytochrome C1 signature 144 164 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PRINTS Cytochrome C1 signature 177 201 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PRINTS Cytochrome C1 signature 215 226 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PRINTS Cytochrome C1 signature 226 245 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PRINTS Cytochrome C1 signature 246 265 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PRINTS Cytochrome C1 signature 265 280 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 Gene3D - 70 265 IPR036909 GO:0009055|GO:0020037
Vvi14g1214 310 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 265 309 IPR021157 -
Vvi14g1214 310 ProSiteProfiles Cytochrome c family profile. 93 200 IPR009056 GO:0009055|GO:0020037
Vvi14g1214 310 PANTHER CYTOCHROME C1 20 310 IPR002326 GO:0009055|GO:0020037
Vvi14g1214 310 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 20 310 - -
Vvi14g1214 310 SUPERFAMILY Cytochrome c 75 264 IPR036909 GO:0009055|GO:0020037
Vvi14g1214 310 Gene3D - 266 309 - -
Vvi14g1214 310 Pfam Cytochrome C1 family 81 297 IPR002326 GO:0009055|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1214 K00413 - vvi:100250724 587.415