Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1237 ATGCTGCTATGTTGGCTAAACTTGGAGAAAACTCAGACTGCTATAGAGATCAAGGCAGCATATGTTGATGTTCGTGATGATACAACTTATGCATGGCGTGCAAAGTCTTTATTGGAAAAAGCATTATCTGCAAATGTTCCAGCCGTAACAACTGGTAGAATTTACTCAGGACATATGAATATAATACATATTAAATGTAAAAATTTATCTACGTCAAATAGTGTGGTAAAAAGAGGTGATAGCATAAGTACTTTTTTAAAACGAGACCTTGGGTTTGGACGCACAATGACCCCACACGGTCTTACGTGGCGATTGTTTATTGGGTTTCACAAATCAAAGTACAAACCCCTAGAAAACGCCCGAAACGCCGAAACGTTTTGTGTGGGCATCATGGGCAGATCGGCGTCTCTCTTTTCTATGGTCCTCTGGCTATGGGTTTGTCTGCAACTCAGACCCACAACCTCTTCAATTTCCCCTCCTCTTCACACTAATCAGGGTTTTCAAGAATCGACGAATTCGAGAAATGTTAAGCAAGATCAGGATGGCGTTCATGAAGTGCATTGCTCGAGAGAAAGGAGTAGGGCAGCATGGAAAATTATTGAGGAGTATTTGATGCCCTTTGTGGAGAAAGAGGGCTATCAGATCTCAAGTAGCTGTAGGCTTCATCATGAAAATGACCTGTACAGGGATCAGGAGCAGCATAAAATCCATGTGGATATAAATGAATGGAGATGTGGGTACTGCAAAAAATCCTTCTATGCGGAGAACTATCTTGATAAGCATTTTGACAATAGACACTACAATTTGCTTAATGTGAGTCAAAACAAGTGCTTGGCAGACGTATGTGGGGCATTGCATTGTGACCATGTGATGGATTCTAAGTTACAGAAGACTAAATGCAATCCTGCAGCTGCTGCAAGGAATCACCATCTGTGTGAGAGTCTTGCTGATGGTTGTTTTCCAGTCAGTGGAGGTCCTTCAGCAAGTCGTCTTCATGAATTCTTCTTGCGCCAATTCTGTGATGCCCACACTTGCACTGGAGGCCGGAAGCCCTTCTCAAGAGGGCGCAAGAAGCGGACAAGTGTTTTCTACCTCTGTATTTCCATATTGACTCTGATGTTGCTGCCACTTTTCTACTTCTTTGTTTATTTGTACCAGAGGGGATTGAGAAGGGGTGCCCAAAATTTTCGGCGCATCTCTGAAAGTGGACGGAAGAAAAAACCAACTTAG 1230 42.76 MLLCWLNLEKTQTAIEIKAAYVDVRDDTTYAWRAKSLLEKALSANVPAVTTGRIYSGHMNIIHIKCKNLSTSNSVVKRGDSISTFLKRDLGFGRTMTPHGLTWRLFIGFHKSKYKPLENARNAETFCVGIMGRSASLFSMVLWLWVCLQLRPTTSSISPPLHTNQGFQESTNSRNVKQDQDGVHEVHCSRERSRAAWKIIEEYLMPFVEKEGYQISSSCRLHHENDLYRDQEQHKIHVDINEWRCGYCKKSFYAENYLDKHFDNRHYNLLNVSQNKCLADVCGALHCDHVMDSKLQKTKCNPAAAARNHHLCESLADGCFPVSGGPSASRLHEFFLRQFCDAHTCTGGRKPFSRGRKKRTSVFYLCISILTLMLLPLFYFFVYLYQRGLRRGAQNFRRISESGRKKKPT* 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26365545 26378292 - Vvi14g1237 Vvi14g1237 776304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1237 409 PANTHER ZINC FINGER PROTEIN-RELATED 136 408 - -
Vvi14g1237 409 ProSiteProfiles Zinc finger C2H2 type domain profile. 243 266 IPR013087 -
Vvi14g1237 409 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 136 408 - -
Vvi14g1237 409 MobiDBLite consensus disorder prediction 161 177 - -
Vvi14g1237 409 MobiDBLite consensus disorder prediction 161 187 - -
Vvi14g1237 409 ProSitePatterns Zinc finger C2H2 type domain signature. 245 266 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1237 Vvi17g906 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13956 None None None None Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1237 - - vri:117931216 570.081