Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1297 ATGGAATCGGTTGGTGATGGAGTTAGTTCTTTCCCAAAGACTCATAATTCTGCTTCTGTGATGGGCTATAACCTTTCTTCCATCTCTGGGACTTCTCGCCCCACTCGGCTTCCACCTCCAAAACAATCTAGAAATGACGGGGCTTCTTCTGCATCTTATGCAACTGTTCCTGACCATGGGATGAAGACTGTCCTACATGCAGTGGACTCTGTAATCAATGAAAAGCATTCCCACAAAACAGCACAAGATCATATGCATCTCGAAGAACTACATACTTCATCAAAACAATTATATAAATCAAACAAAGATCAATTGAATTGTAATTCAAGTGGATTGATAGGTCCTGAAAATTTTGTTCCAGGCCCATGTAAAGGAGGTGTTGTAGAACCAAACAGCCAATTAACGGCTCAATCAGCAATTAGCTTTTGCGCTAGTCCTCAAAACAGTCTATACTCTGCAACTCAGTACACAGAAGCAAAACAAAGTTTCACCAACACGGAGGTTAGTGAATGTGCAAGCAGTGTAGAGAAGTCTGGTGAAAGTGCTGAAATTAGCAACTCCTGTGATTTTGCTGAGAGCAGGAAGACTAGTATCTACAGAGGTAGCACTGGCAGTGATGTTAGTGATGAAAGCAGCTCCAGCAGTTTTAGTAGCACTCTTTACAAGCCTCACAAGGCAAATGATACAAGATGGGAAGCAATTCAAGCTGTGCGATCTCGTGATGGGGTGTTGGGTTTGAACCACTTCAGGCTGTTGAAGAAATTGGGATGTGGAGATATAGGCACTGTTTATCTGTCAGAGTTGAGTTGCACTAGAAGTTACTTTGCCATGAAAGTTATGGATAAAGGAGCTCTAGCGAGCCGGAAGAAGCTTCTGAGGGCTCAAACAGAGAGAGAGATATTGCAATCTTTGGATCATCCATTTCTGCCTACTTTGTACACACACTTTGAGACAGAGAAGTTCTCTTGCTTGGTGATGGAGTTCTGCCCTGGGGGTGATTTGCACGCACTCAGACAGAGACAACCAGGGAAATATTTCTCAGAGCATGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTATTTGCACATGCTTGGGATCATTTACAGGGACCTGAAACCAGAGAATGTTCTGGTGAGGGAAGATGGGCATATAATGCTTTCAGACTTTGACCTCTCCCTAAGGTGTGCTCTCATAGCTGAACCCACAACCGCTCGATCAATGTCCTTTGTGGGTACTCACGAGTACTTGGCACCTGAAATCATTAAAGGTGAAGGGCATGGCAGTGCTGTTGACTGGTGGACATTTGGGATCTTTCTCTATGAGCTCTTGTTTGGTAAAACTCCTTTTAAGGGAGCTGGAAACCGGGCTACTCTCTTCAATGTGGTTGGGCAGCCGCTTAGATTTCCTGAGTCACCTGCAGTAAGCTTTGCTGCAAGGGACTTGATAAGAGGTTTGCTTGTGAAAGAACCACAGCATCGCCTTGCATATAGGCGTGGAGCAACAGAAGTTAAGCAGCATCCGTTCTTTCAGAGTGTGAATTGGGCACTCATTCGATGTACCAATCCGCCAGACATGCCAAAACCATTCATGATAGACTTCTCTGCAAGAAGTGTTGATGTGAAGCCTTCTGGTAATTATTTAGAGATCGATTTCTTTTGA 1671 44.23 MESVGDGVSSFPKTHNSASVMGYNLSSISGTSRPTRLPPPKQSRNDGASSASYATVPDHGMKTVLHAVDSVINEKHSHKTAQDHMHLEELHTSSKQLYKSNKDQLNCNSSGLIGPENFVPGPCKGGVVEPNSQLTAQSAISFCASPQNSLYSATQYTEAKQSFTNTEVSECASSVEKSGESAEISNSCDFAESRKTSIYRGSTGSDVSDESSSSSFSSTLYKPHKANDTRWEAIQAVRSRDGVLGLNHFRLLKKLGCGDIGTVYLSELSCTRSYFAMKVMDKGALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCALIAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPESPAVSFAARDLIRGLLVKEPQHRLAYRRGATEVKQHPFFQSVNWALIRCTNPPDMPKPFMIDFSARSVDVKPSGNYLEIDFF* 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26961569 26966511 - Vvi14g1297 Vvi14g1297 776364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1297 556 CDD STKc_phototropin_like 248 532 - -
Vvi14g1297 556 MobiDBLite consensus disorder prediction 24 52 - -
Vvi14g1297 556 MobiDBLite consensus disorder prediction 201 221 - -
Vvi14g1297 556 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 98 400 - -
Vvi14g1297 556 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 5 97 - -
Vvi14g1297 556 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 401 556 - -
Vvi14g1297 556 Gene3D Phosphorylase Kinase; domain 1 248 332 - -
Vvi14g1297 556 Gene3D Transferase(Phosphotransferase) domain 1 333 523 - -
Vvi14g1297 556 SMART serkin_6 249 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1297 556 ProSiteProfiles Protein kinase domain profile. 249 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1297 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Vvi14g1297 556 PANTHER FLIPPASE KINASE 1-RELATED 98 400 - -
Vvi14g1297 556 PANTHER FLIPPASE KINASE 1-RELATED 401 556 - -
Vvi14g1297 556 PANTHER FLIPPASE KINASE 1-RELATED 5 97 - -
Vvi14g1297 556 MobiDBLite consensus disorder prediction 24 58 - -
Vvi14g1297 556 Pfam Protein kinase domain 250 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1297 556 SUPERFAMILY Protein kinase-like (PK-like) 223 539 IPR011009 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76196 PF00069 Pkinase 8.80E-62 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1297 K08286 - vvi:100268156 761.14