Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1297 | ATGGAATCGGTTGGTGATGGAGTTAGTTCTTTCCCAAAGACTCATAATTCTGCTTCTGTGATGGGCTATAACCTTTCTTCCATCTCTGGGACTTCTCGCCCCACTCGGCTTCCACCTCCAAAACAATCTAGAAATGACGGGGCTTCTTCTGCATCTTATGCAACTGTTCCTGACCATGGGATGAAGACTGTCCTACATGCAGTGGACTCTGTAATCAATGAAAAGCATTCCCACAAAACAGCACAAGATCATATGCATCTCGAAGAACTACATACTTCATCAAAACAATTATATAAATCAAACAAAGATCAATTGAATTGTAATTCAAGTGGATTGATAGGTCCTGAAAATTTTGTTCCAGGCCCATGTAAAGGAGGTGTTGTAGAACCAAACAGCCAATTAACGGCTCAATCAGCAATTAGCTTTTGCGCTAGTCCTCAAAACAGTCTATACTCTGCAACTCAGTACACAGAAGCAAAACAAAGTTTCACCAACACGGAGGTTAGTGAATGTGCAAGCAGTGTAGAGAAGTCTGGTGAAAGTGCTGAAATTAGCAACTCCTGTGATTTTGCTGAGAGCAGGAAGACTAGTATCTACAGAGGTAGCACTGGCAGTGATGTTAGTGATGAAAGCAGCTCCAGCAGTTTTAGTAGCACTCTTTACAAGCCTCACAAGGCAAATGATACAAGATGGGAAGCAATTCAAGCTGTGCGATCTCGTGATGGGGTGTTGGGTTTGAACCACTTCAGGCTGTTGAAGAAATTGGGATGTGGAGATATAGGCACTGTTTATCTGTCAGAGTTGAGTTGCACTAGAAGTTACTTTGCCATGAAAGTTATGGATAAAGGAGCTCTAGCGAGCCGGAAGAAGCTTCTGAGGGCTCAAACAGAGAGAGAGATATTGCAATCTTTGGATCATCCATTTCTGCCTACTTTGTACACACACTTTGAGACAGAGAAGTTCTCTTGCTTGGTGATGGAGTTCTGCCCTGGGGGTGATTTGCACGCACTCAGACAGAGACAACCAGGGAAATATTTCTCAGAGCATGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTATTTGCACATGCTTGGGATCATTTACAGGGACCTGAAACCAGAGAATGTTCTGGTGAGGGAAGATGGGCATATAATGCTTTCAGACTTTGACCTCTCCCTAAGGTGTGCTCTCATAGCTGAACCCACAACCGCTCGATCAATGTCCTTTGTGGGTACTCACGAGTACTTGGCACCTGAAATCATTAAAGGTGAAGGGCATGGCAGTGCTGTTGACTGGTGGACATTTGGGATCTTTCTCTATGAGCTCTTGTTTGGTAAAACTCCTTTTAAGGGAGCTGGAAACCGGGCTACTCTCTTCAATGTGGTTGGGCAGCCGCTTAGATTTCCTGAGTCACCTGCAGTAAGCTTTGCTGCAAGGGACTTGATAAGAGGTTTGCTTGTGAAAGAACCACAGCATCGCCTTGCATATAGGCGTGGAGCAACAGAAGTTAAGCAGCATCCGTTCTTTCAGAGTGTGAATTGGGCACTCATTCGATGTACCAATCCGCCAGACATGCCAAAACCATTCATGATAGACTTCTCTGCAAGAAGTGTTGATGTGAAGCCTTCTGGTAATTATTTAGAGATCGATTTCTTTTGA | 1671 | 44.23 | MESVGDGVSSFPKTHNSASVMGYNLSSISGTSRPTRLPPPKQSRNDGASSASYATVPDHGMKTVLHAVDSVINEKHSHKTAQDHMHLEELHTSSKQLYKSNKDQLNCNSSGLIGPENFVPGPCKGGVVEPNSQLTAQSAISFCASPQNSLYSATQYTEAKQSFTNTEVSECASSVEKSGESAEISNSCDFAESRKTSIYRGSTGSDVSDESSSSSFSSTLYKPHKANDTRWEAIQAVRSRDGVLGLNHFRLLKKLGCGDIGTVYLSELSCTRSYFAMKVMDKGALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCALIAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRFPESPAVSFAARDLIRGLLVKEPQHRLAYRRGATEVKQHPFFQSVNWALIRCTNPPDMPKPFMIDFSARSVDVKPSGNYLEIDFF* | 557 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 26961569 | 26966511 | - | Vvi14g1297 | Vvi14g1297 | 776364 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1297 | 556 | CDD | STKc_phototropin_like | 248 | 532 | - | - | |
Vvi14g1297 | 556 | MobiDBLite | consensus disorder prediction | 24 | 52 | - | - | |
Vvi14g1297 | 556 | MobiDBLite | consensus disorder prediction | 201 | 221 | - | - | |
Vvi14g1297 | 556 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL3 | 98 | 400 | - | - | |
Vvi14g1297 | 556 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL3 | 5 | 97 | - | - | |
Vvi14g1297 | 556 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL3 | 401 | 556 | - | - | |
Vvi14g1297 | 556 | Gene3D | Phosphorylase Kinase; domain 1 | 248 | 332 | - | - | |
Vvi14g1297 | 556 | Gene3D | Transferase(Phosphotransferase) domain 1 | 333 | 523 | - | - | |
Vvi14g1297 | 556 | SMART | serkin_6 | 249 | 513 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1297 | 556 | ProSiteProfiles | Protein kinase domain profile. | 249 | 513 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1297 | 556 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 370 | 382 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi14g1297 | 556 | PANTHER | FLIPPASE KINASE 1-RELATED | 98 | 400 | - | - | |
Vvi14g1297 | 556 | PANTHER | FLIPPASE KINASE 1-RELATED | 401 | 556 | - | - | |
Vvi14g1297 | 556 | PANTHER | FLIPPASE KINASE 1-RELATED | 5 | 97 | - | - | |
Vvi14g1297 | 556 | MobiDBLite | consensus disorder prediction | 24 | 58 | - | - | |
Vvi14g1297 | 556 | Pfam | Protein kinase domain | 250 | 513 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1297 | 556 | SUPERFAMILY | Protein kinase-like (PK-like) | 223 | 539 | IPR011009 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76196 | PF00069 | Pkinase | 8.80E-62 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1297 | K08286 | - | vvi:100268156 | 761.14 |