Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g1310 | ATGGCTGGATTAGAGGAATTGAAAAAGAAACTTTCACCATTGTTTGATCCCGATAAAGGCTTATCAGCTGGATCAACTTTGGACCCTTGTGATTCTTATATGCTGTCGGATGGTGGAACAGTTAACTTATTGAGCAAATCATGTGGAGTATACAATATAAATGAGCTCGGGTTGCTAAAGTGCTCATCTTCTCCAGTAGATGAAGCAGATTATAAAGAAAGGACTTATCGGTGTGCTTCCCATGAGATGAGGATTTTTGGAGCCATAGGTAGTGGTGCAAGCAGTGTTGTGCAGAGAGCTATCCATATACCCACTCATAGAATTATTGCGTTGAAGAAGATTAATATTTTTGAAAAGGAGAAAAGGCAACAGCTTCTCACTGAGATAAGGATGCTGTGTGAGGCACCTTGTTATGAGGGCCTTGTGGAGTTTCATGGGGCATTTTATACTCCAGACTCTGGACAGATAAGTATAGCTTTAGAGTACATGGATGGAGGGTCCTTGGCAGATGTCATACGGGTGCAGAAATGTATACCAGAACCAGTTCTTTCATCTATGGTTCGAAAGCTACTACATGGACTATGCTACTTGCATGGAGTTCGACATTTAGTTCATAGAGACATAAAGCCAGCAAATTTGCTAGTAAATCTTAAGGGGGAGCCAAAGATAACAGATTTTGGTATAAGTGCTGGCTTAGAGAATTCTGTGGCAATGTGTGCTACTTTTGTTGGAACTGTTACATATATGTCACCTGAGCGAATTCGGAATGAGAACTATTCTTATCCAGCTGATATTTGGAGCCTTGGTCTTGCACTCTTTGAATGTGGTACAGGGGAATTCCCATATACAGCTAATGAAGGACCTGTTAATCTTATGTTGCAGATACTGGATGATCCATCACCATCTCCACCAAAACACATATTTTCAGCTGAGTTCTGCTCATTTATTGATGCTTGCCTTCAGAAGGATGCAGATGCAAGGCCGACAGCAGAGCAGCTTCTTTCCCACCCATTTATTACAAAGTATGAGCATGCCAGAGTAGATTTAACGGCATTTGTCCGAAGCATTTTTGACCCAACACAAAAGATGAAGGATCTGGCAGATATGCTGATGATACACTATTACTTACTTTTTGATGGGCCTGATGACCTTTGGCAACATACAAAGACCTTATATAAGAAAGATTCAACTTTCAGTTTCTCGGGTAAACAATCTGTTGGTTCAGATGATATTTTTGCTACTTTGTCGGGCATTCGAAGTACATTAGTGGGTGACTGGCCTCCTGAACGACTTGTGCATGTTGTGGAAAAACTTCAGTGCCGTGGTCATGGACAAGATGGAGTTGCCATTCGTGTATCAGGATCCTTTATTGTTGGGAATCAGTTCCTCATATGTGGAGATGGTGTACAAGTAGAAGGTTTGCCTAGTTTTAAAGATCTTTCAATCGAAATTTCTAGCAATCGGATGGGAACATTTCAGGAGCAGTTTATCATGGAACCGGGAGATGCCATTGGCCGCTACTTCATAACCAAACAAGATCTCTACATCATCCAATAG | 1557 | 41.3 | MAGLEELKKKLSPLFDPDKGLSAGSTLDPCDSYMLSDGGTVNLLSKSCGVYNINELGLLKCSSSPVDEADYKERTYRCASHEMRIFGAIGSGASSVVQRAIHIPTHRIIALKKINIFEKEKRQQLLTEIRMLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVIRVQKCIPEPVLSSMVRKLLHGLCYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYTANEGPVNLMLQILDDPSPSPPKHIFSAEFCSFIDACLQKDADARPTAEQLLSHPFITKYEHARVDLTAFVRSIFDPTQKMKDLADMLMIHYYLLFDGPDDLWQHTKTLYKKDSTFSFSGKQSVGSDDIFATLSGIRSTLVGDWPPERLVHVVEKLQCRGHGQDGVAIRVSGSFIVGNQFLICGDGVQVEGLPSFKDLSIEISSNRMGTFQEQFIMEPGDAIGRYFITKQDLYIIQ* | 519 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 27139002 | 27145873 | - | Vvi14g1310 | Vvi14g1310 | 776377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g1310 | 518 | ProSiteProfiles | Protein kinase domain profile. | 83 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1310 | 518 | ProSiteProfiles | Nuclear transport factor 2 domain profile. | 366 | 516 | IPR018222 | - | |
Vvi14g1310 | 518 | CDD | PKc_MAPKK_plant_like | 84 | 343 | - | - | |
Vvi14g1310 | 518 | Gene3D | - | 361 | 517 | - | - | |
Vvi14g1310 | 518 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 360 | - | - | |
Vvi14g1310 | 518 | Gene3D | Phosphorylase Kinase; domain 1 | 76 | 158 | - | - | |
Vvi14g1310 | 518 | SUPERFAMILY | Protein kinase-like (PK-like) | 85 | 361 | IPR011009 | - | |
Vvi14g1310 | 518 | PANTHER | - | 2 | 517 | - | - | |
Vvi14g1310 | 518 | SUPERFAMILY | NTF2-like | 364 | 516 | IPR032710 | - | |
Vvi14g1310 | 518 | SMART | serkin_6 | 83 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1310 | 518 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 2 | 517 | - | - | |
Vvi14g1310 | 518 | Pfam | Protein kinase domain | 87 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi14g1310 | 518 | ProSitePatterns | Protein kinases ATP-binding region signature. | 89 | 112 | IPR017441 | GO:0005524 | |
Vvi14g1310 | 518 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 203 | 215 | IPR008271 | GO:0004672|GO:0006468 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76197 | PF00069 | Pkinase | 1.10E-58 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g1310 | K20607 | - | vvi:100257776 | 1052.35 |