Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1326 ATGGAAACTGGTCTCCTTCTCTCCATCATCTTCCTCGCAACAACATTCTCTTTCATCCATTCCACAAAAGCCAACCCCAGAGCCGACATCATCGCTAGAATATGCAGCAATGACTACGCCCACAACTTCTCCAATTACCTCGACAGCTACTCCAAAATTATAACCCAGTTGCGAGATGAACTGCCTAAGACAAAGTTCGCATTCAAGGAAGCTGGAGAGCCTCCTGACAAAATCTATGTGTTGGCTCAGTGCATGGATGATCTCTCCTTCCAGGATTGTCAAGCCTGCTTCTCTCAGATCAGTTCTCTTTTCCCTGGTTGCTTTCCTGCAACTGGCGGTCGTGTTTATCTTGATGGCTGCTTCCTTAGAGGCGACAATTACAGCTTCTTTCAAGATACTCTCACGCCCATGGATTATTTGGTAACTGCTTTTGTTTTCTTAGTATTTTTTTTTATTTTTTTGGCTGACATCAGCGGTGTCCAGAATTTTGATGATGTAGCCAAGAGTGTGATTGATGAACTGGTCAGGATGACACCAAGTAGGGACGGGTATGCAGCATATGATGAGAGTGCCAATGGTATAACAGTTTACGGTATGGCTAGTTGTTGGAAGACTTTGGACCGTGATCGTTGTGCATCATGCCTTGCTAGTGCAGCCATTTCTGCCTTTGCTTGCTTCCCATCTGCAGAAGGGCGTGTGCTCAATGCTGGCTGTTTTCTACGTTACTCTGATTACAAATTTTATCAGGGCTTTGATTTTTCTTTTTATAGTTTTTCATGGGGATCTCTTGCAGATGCTACATTATCATTCATCTCACACGTCGTTGGCGTGGTCAGTGTCTGCATTTTGGCGATTATTATCGGGTTTTTCATTGGTAAAGCTGCTTACCAAAAACGAAATCAGCAAAATGAAGCAAATGGTAACTCTATTATGAGGAAATTTGTTATGATTGAACACATTCCTCAAATCATCTTCTTGATTAATGAAGAAATTGAAGTGGACAGCTCGGTTGTAAAGAGAAGCTTGCAGTTCAAGTACACGACTCTTGAAAAAGCAACCGACTACTTCAATGAAGCCAACAAACTTGGGCAAGGTGGATTTGGTGAAGTGTTCAAGGGAACCTTAAGAGATGGCAGAGAAATTGCTATAAAGCGTTTATTCATAACGGGACAGAGTGGAGCTCAGGAGGTTTATAACGAAATAGACATTATAGGCAGTGCCTGCCACAAAAACTTGGTTCGTTTCCTTGGTTGCTGCTTCACCAGACATGATAGCTTCCTTGTCTATGAATTCCTGCCCAACAGAAGCCTCGATCGAGTCTTATTTGACACAGAGAAGAAGAAAGAACTACCCTGGAAGATCAGGCTTGGAATAATCATGGGAACAGCAGAAGGCTTAGAGTACCTTCACAAAGACTGTCACGTTCGAATCATTCATAGAGACATCAAGGCCAGCAACGTCTTATTAGACTTCAGATACAGACCAAAGATTGCAGATTTTGGTCTGGCAAGGTTTTATTCCACTGACAGAGCCCTCACCGGCACTGCCATTGCAGGCACACTAGGGTACATGGCCCCTGAATACCTAGCTCAGGGCCGATTAACCGACAAGGTGGATGTTTATAGCTATGGAGTTCTCATACTTGAGATTGTCAGTGGTGTGCAGAATAACAAATTTCAGCTTGATGACTCCCTCAACACTCTAGCCACTGCTACATGGAAGCACTTTCAGTCAAATACAATGACTGAGATTATAGACAAGGGCATGGAGATTGAAGATATGGAAGAAGTCACAAGAGTAATTCAGGTGGGTTTGTTGTGTACTCAAGAATCACCCACTTTACGCCCTGCCATGACTGAAATAATTCAAATGCTTAAACAAAAGGATGTCTCATTGCCTATTCCATCCAAGCCTCCATTCACTGAAGAAAATTTGACAATTTCTCCTGCATTGGGGTGTCCTAGGAGACCAGCTGTGGATGCATATGATCTATGTATATCTTACACAGAACTTCTGCATTTATTACGGACACTATTGAACAGTCAAGGTCATTGGACCAAAGACAGCGACACTATGGAAGGGAAAGTGAACTTCATACGTATAAAATCCATGCCTTCCTCGATCAAAGTTCACTCTAAACCCACATGGCTGATCTCCTTCTTCATCCTCTTCTCTCTGTCCTCCTCCGATCCCAGAACCTCCGAAGCTGGGCTCTACTGCAGCCCAGCCAAGTCAACGGACAAAAACTTTTGGGGCGATTTGGTGGAGGGAGGAGCGGTGGGAGTGTATGCTTTGGCAGAGTGTTGGAAGACAGTTAACAGTAGTGGATGCAGAGCTTGCTTGCAGAAGGCAAGCAATGAAGTGAGAGGGTGTCTTCCAGGAAAGGAAGGGAGAGGGTTGAATGCTGGCTGCTACTTGAGGTATTCAACTGAAAAATTCTATGATAATGGAGGGGAATCAGAGGGTGGTAGTGGGTCTTCAAGAACAGGGCTCACCATAGCCATCGTTTTAGCTGCAGCAGCGTTAATCCTGGTCTCTCTCTTTGCTGCCTATGCAGGATATGCAAGTTTATCCAAGATAAAAGAAGAACGCAAAAATCTCGGAAAGGTTGCATCTATTATCAACAAGTCTAGTTTGAATTTCAAATACGAAACACTTGAGAGGGCAACAGAGTACTTTAATCCATCAAGGAAATTAGGCCAAGGGGGAGCTGGTTCTGTGTACATGGGGACTCTCCCAAATGGAGAAATTGTAGCTGTCAAGAGGCTAATTTTCAACACCAGGCAATGGGTAGATGAGTTCTTCAATGAGGTAAACTTGATCAGTGGCATTCAACACAAAAACCTTGTGAAGCTTTTGGGATGTAGCATTGAAGGCCCTGAGAGCCTCCTGGTTTATGAATATGTACCCAACAGGAGCCTTGATCAGTTCATGTTTGATAAGAACAAGATTCAAACCTTGAATTGGGAGCAGAGGTTTGATATAATAGTAGGAACAGCTGAAGGGCTTGCATACCTTCATGGCGGTTTGCAGATGCGAATAATCCACAGGGACATAAAAGGCAGCAACATTCTTCTTGATGAGAATCTAACTCCAAAGATTGCCGATTTTGGACTTGCTCGGTGTTTAGGGGCTGATAAGACTCATCTTAGCACAGGCATTGCAGGAACACTAGGGTATATGGCTCCTGAATATCTTGTTCGAGGACAACTTACAGAGAAAGCAGATGTTTATAGTTTTGGTGTACTTGTTCTTGAGATTGTATGTGGTAGGAAGAACAGTGTCTTCACACAGGACTCTGGTTCTCTTCTACAAAGAGTTTGGAAGTTATACAAGTCAAATAAATTGGTTGAAGCTATTGATGATTGCCTGAAAGATGATTTTCCAGAAAAGGAGGCATCTGATGTGCTCCGAATTGGGCTTTTATGTACACAAGCTTCAGTTGCTTTAAGACCTTCCATGACTGAAGTGGTTTGGATGCTAACTCATAAAGATTGGGAGATTCCTCCACCAAATCAACCTCCTTTCCTGAATGCTCATGTGCTGGAGTCAGCTATCTCCAGGTCTAATAGTGCAAACACTTCAATGTCAAATATGGCAACAAAGATTGAAGTGTCCGGCCCTTTTACAGAGTCCTCCAGCATGCACAGTTCCATGGACCATCAAGAAGAACAGAAACTGATGCAACCCACTTGCTCTACCATTCTGTCTACTCCCATATGTGGGCTTGCTTTCTAG 3738 43.47 METGLLLSIIFLATTFSFIHSTKANPRADIIARICSNDYAHNFSNYLDSYSKIITQLRDELPKTKFAFKEAGEPPDKIYVLAQCMDDLSFQDCQACFSQISSLFPGCFPATGGRVYLDGCFLRGDNYSFFQDTLTPMDYLVTAFVFLVFFFIFLADISGVQNFDDVAKSVIDELVRMTPSRDGYAAYDESANGITVYGMASCWKTLDRDRCASCLASAAISAFACFPSAEGRVLNAGCFLRYSDYKFYQGFDFSFYSFSWGSLADATLSFISHVVGVVSVCILAIIIGFFIGKAAYQKRNQQNEANGNSIMRKFVMIEHIPQIIFLINEEIEVDSSVVKRSLQFKYTTLEKATDYFNEANKLGQGGFGEVFKGTLRDGREIAIKRLFITGQSGAQEVYNEIDIIGSACHKNLVRFLGCCFTRHDSFLVYEFLPNRSLDRVLFDTEKKKELPWKIRLGIIMGTAEGLEYLHKDCHVRIIHRDIKASNVLLDFRYRPKIADFGLARFYSTDRALTGTAIAGTLGYMAPEYLAQGRLTDKVDVYSYGVLILEIVSGVQNNKFQLDDSLNTLATATWKHFQSNTMTEIIDKGMEIEDMEEVTRVIQVGLLCTQESPTLRPAMTEIIQMLKQKDVSLPIPSKPPFTEENLTISPALGCPRRPAVDAYDLCISYTELLHLLRTLLNSQGHWTKDSDTMEGKVNFIRIKSMPSSIKVHSKPTWLISFFILFSLSSSDPRTSEAGLYCSPAKSTDKNFWGDLVEGGAVGVYALAECWKTVNSSGCRACLQKASNEVRGCLPGKEGRGLNAGCYLRYSTEKFYDNGGESEGGSGSSRTGLTIAIVLAAAALILVSLFAAYAGYASLSKIKEERKNLGKVASIINKSSLNFKYETLERATEYFNPSRKLGQGGAGSVYMGTLPNGEIVAVKRLIFNTRQWVDEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFMFDKNKIQTLNWEQRFDIIVGTAEGLAYLHGGLQMRIIHRDIKGSNILLDENLTPKIADFGLARCLGADKTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLVLEIVCGRKNSVFTQDSGSLLQRVWKLYKSNKLVEAIDDCLKDDFPEKEASDVLRIGLLCTQASVALRPSMTEVVWMLTHKDWEIPPPNQPPFLNAHVLESAISRSNSANTSMSNMATKIEVSGPFTESSSMHSSMDHQEEQKLMQPTCSTILSTPICGLAF* 1246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27360730 27370901 - Vvi14g1326 Vvi14g1326 776393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1326 1245 Pfam Salt stress response/antifungal 35 127 IPR002902 -
Vvi14g1326 1245 Pfam Salt stress response/antifungal 161 245 IPR002902 -
Vvi14g1326 1245 Pfam Salt stress response/antifungal 750 810 IPR002902 -
Vvi14g1326 1245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Vvi14g1326 1245 ProSiteProfiles Protein kinase domain profile. 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1326 1245 Gene3D - 27 129 IPR038408 -
Vvi14g1326 1245 Gene3D - 155 247 IPR038408 -
Vvi14g1326 1245 Gene3D - 733 813 IPR038408 -
Vvi14g1326 1245 ProSiteProfiles Protein kinase domain profile. 893 1142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1326 1245 ProSiteProfiles Gnk2-homologous domain profile. 712 813 IPR002902 -
Vvi14g1326 1245 Gene3D Transferase(Phosphotransferase) domain 1 969 1167 - -
Vvi14g1326 1245 Gene3D Transferase(Phosphotransferase) domain 1 432 632 - -
Vvi14g1326 1245 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 760 1198 - -
Vvi14g1326 1245 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 2 650 - -
Vvi14g1326 1245 SMART serkin_6 893 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1326 1245 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1326 1245 Pfam Protein tyrosine and serine/threonine kinase 359 625 IPR001245 GO:0004672|GO:0006468
Vvi14g1326 1245 Pfam Protein tyrosine and serine/threonine kinase 896 1159 IPR001245 GO:0004672|GO:0006468
Vvi14g1326 1245 SUPERFAMILY Protein kinase-like (PK-like) 879 1195 IPR011009 -
Vvi14g1326 1245 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Vvi14g1326 1245 ProSiteProfiles Gnk2-homologous domain profile. 145 247 IPR002902 -
Vvi14g1326 1245 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 650 - -
Vvi14g1326 1245 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 760 1198 - -
Vvi14g1326 1245 SUPERFAMILY Protein kinase-like (PK-like) 336 627 IPR011009 -
Vvi14g1326 1245 CDD STKc_IRAK 899 1162 - -
Vvi14g1326 1245 Gene3D Phosphorylase Kinase; domain 1 854 968 - -
Vvi14g1326 1245 Gene3D Phosphorylase Kinase; domain 1 325 431 - -
Vvi14g1326 1245 CDD STKc_IRAK 362 627 - -
Vvi14g1326 1245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1014 1026 IPR008271 GO:0004672|GO:0006468
Vvi14g1326 1245 ProSiteProfiles Gnk2-homologous domain profile. 28 129 IPR002902 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g653 Vvi14g1326 ECH
Vvi14g1326 Vvi17g774 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76198 PF07714 PK_Tyr_Ser-Thr 1.80E-45 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1326 - - vvi:100262995 1174.46