Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1332 ATGTACTTGGAAATAATTCCTGGTTGTTTGGTTCTTGAGTCGGGCACTGGAAGTGGATCTTTGACTACTTCACTTGCAAGGGCTGTAGCTCCTAATGGGCATGTCTATACATTTGATTTTCATGAACAAAGGGCTGCTTCAGCTAGGGAGGATTTTGAGAAAATAGGATTGAGTAGCTTCGTCACTGTGGGAGTGAGGGACATTCAGGGTGAGGGATTTCCTGATGAATTTTCTGGGCTGGCGGATTCCGTCTTCCTAGACCTACCACAACCTTGGTTGGCCATTCCTTCCGCTGGAAAAATGTTGAAAGAAGATGGGGTATTGTGCTCTTTTTCACCCTGCATTGAGCAAGTACAACGCTCATCAGAAACTCTTACTTCAAATTTTACAGACATAAGGACATTTGAAGTGCTTCTTCGCACATATGAAGTGCGAGAAGGAAAAATGGATTGCAGCCAGGGTAATGAAGGCGTAATTAAAATTATTTTTTGGAATGGAATTAATTTTTGGACATGTGCTGATTGTCTCAGTGAAGTGGTGGCTTATTGTCTCCATGCAACGTTAAAGCGCTCTCTCTCCGTGTCTGAAATTTTTCTCTCTCTACAGGCTCAAAGAATGCATATCACTGCATTGGCTCTCTCTCCTTCAGCTCCGTTTCTGAAACCAAAAAATCTTCTCAATCGAAACCCTAACCCTAGCCCTGGAGTCGTTCCAGTTCAACTCCACCTCTTAACTTCTACCAATGGTCTCTCATGTCACAGAAGTTCATCTCTCTTCTCTTCTCTCTCCTCTGTTTTGTTCCCATATCCAAACCCCAGATTCAGTGGCTTCAAGTTCAGAGCCTCTTCGGTTCCCGAGAATGCTGAAGAGACCGAGAAATCGAGCAATTTGGGTGGTATTTTGCAGCTCGGGTCTATGTTCGCGATCTGGTATCTGTTGAACATTTACTTCAACATCTTCAACAAGCAGATCCTGAAGGTCTATCCATTCCCAGCAACAGTTACGGCATTTCAGTTTGGATGTGGGACTGTGCTGGTTATTTTGATGTGGGCATTCAACCTATACAAAAGACCAAAAATCAGTAAATCACAGTTTTCAGGAATCCTAATCCTGGCTGTGACACACACCATGGGTAACCTTTTGACCAACTTAAGCCTCAGAAAAGTTGCTGTTTCATTCACTCACACAATCAAAGCTATGGAGCCCTTTTTTACAGTTGTTCTTGCTACCCTCTTTCTTGGGGAGAAACCCACTCTCCCGATTGTTTCTTCCCTTGTTCCAATTGTAGGTGGAGTGGCACTGGCCTCATTCACAGAATCCTCTTTTAACTGGACTGGTTTCTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCACGTAATGTGTTCAGCAAAAAATTCATGGTCAACAAAGAGGAAGCTTTGGATACCATCAACCTCTTCTCAGTAATAACAGTCATTTCTTTCCTCCTGTGTACCCCTGTGGCTATTTTCATTGAAGGCATCAAGTTTACTCCGTCATACCTGCAATTTGCAGCAAGTCAAGGTTTGAATGTTAGAGAGCTATGTGTGAGATCTCTTTTGGCTGGGATCTGCTTCCATTCTTATCAGCAGGTTTCTTATACGATACTACAGATGGTATCTCCTGTGACACATGCAGTTGGAAATTGTGTGAAGCGAGTAGTGGTGATCATCTCTTCAGTCATCTTCTTCCAAACACCTGCTTCACCCATTAACTCCCTTGGAACTGGAGTGGCTCTTGTTGGGGTCTTCTTGTATTCAAGAGCAAAGCGGATGAAGCCAAAGCCGAAGGCTGCATGA 1821 43.55 MYLEIIPGCLVLESGTGSGSLTTSLARAVAPNGHVYTFDFHEQRAASAREDFEKIGLSSFVTVGVRDIQGEGFPDEFSGLADSVFLDLPQPWLAIPSAGKMLKEDGVLCSFSPCIEQVQRSSETLTSNFTDIRTFEVLLRTYEVREGKMDCSQGNEGVIKIIFWNGINFWTCADCLSEVVAYCLHATLKRSLSVSEIFLSLQAQRMHITALALSPSAPFLKPKNLLNRNPNPSPGVVPVQLHLLTSTNGLSCHRSSSLFSSLSSVLFPYPNPRFSGFKFRASSVPENAEETEKSSNLGGILQLGSMFAIWYLLNIYFNIFNKQILKVYPFPATVTAFQFGCGTVLVILMWAFNLYKRPKISKSQFSGILILAVTHTMGNLLTNLSLRKVAVSFTHTIKAMEPFFTVVLATLFLGEKPTLPIVSSLVPIVGGVALASFTESSFNWTGFWSAMASNLTNQSRNVFSKKFMVNKEEALDTINLFSVITVISFLLCTPVAIFIEGIKFTPSYLQFAASQGLNVRELCVRSLLAGICFHSYQQVSYTILQMVSPVTHAVGNCVKRVVVIISSVIFFQTPASPINSLGTGVALVGVFLYSRAKRMKPKPKAA* 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27429816 27443141 + Vvi14g1332 Vvi14g1332 776399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1332 606 Pfam Triose-phosphate Transporter family 301 594 IPR004853 -
Vvi14g1332 606 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 240 600 - -
Vvi14g1332 606 CDD AdoMet_MTases 11 108 - -
Vvi14g1332 606 Pfam tRNA methyltransferase complex GCD14 subunit 1 152 IPR014816 GO:0016429|GO:0030488|GO:0031515
Vvi14g1332 606 Gene3D Vaccinia Virus protein VP39 1 205 IPR029063 -
Vvi14g1332 606 SUPERFAMILY Multidrug resistance efflux transporter EmrE 346 438 - -
Vvi14g1332 606 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 301 604 IPR004696 GO:0016021|GO:0022857|GO:0055085
Vvi14g1332 606 PANTHER SOLUTE CARRIER FAMILY 35 240 600 - -
Vvi14g1332 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 145 IPR029063 -
Vvi14g1332 606 ProSiteProfiles tRNA (adenine(57)-N(1)/adenine(58)-N(1) or adenine(58)-N(1)) (EC 2.1.1.219 or EC 2.1.1.220) family profile. 1 176 IPR014816 GO:0016429|GO:0030488|GO:0031515
Vvi14g1332 606 SUPERFAMILY Multidrug resistance efflux transporter EmrE 520 599 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1332 Vvi17g761 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1332 K15283 - vvi:100266464 734.561