Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1350 ATGGAGCATGAGAAAAAATTTCCTTTGGATGCAAAAGACTACAAATTATATGAGGAAGTTGGTGAAGGTGTTAGTGCCACTGTGTACAGGGCTCTCTGCATTCCACTTAATGAGATTGTTGCTATCAAGGTTCTTGATCTGGAAAAATGTAACAATGACCTGGATGGTATTCGTCGAGAGGTGCAGACAATGAGCTTGATTGATCATCCAAATTTATTACAGGCACATTGCTCTTTCACTTCTGGTCACACCCTCTGGGTTGTGATGCCATATATGGCTGGGGGATCTTGCCTTCATATAATGAAATCTGAGTATCCAGAAGGTTTTGATGAACCTGTTATTGCCACCTTATTACGAGAAGTACTTAAAGCCCTTGTTTATCTTCATAACCATGGGCATATCCACAGAGATGTGAAGGCTGGGAATATTTTGATTGATTCTAATGGTGCAGTCAAGTTAGCAGACTTTGGAGTGTCAGCATGCATGTTTGATGCTGGAGATAGGCAACGTTCAAGAAATACTTTTGTTGGAACTCCATGCTGGATGGCTCCTGAAGTTATGCAGCAGTTGCATGGATATGATTTTAAAGCAGACATCTGGTCATTTGGAATAACAGCACTTGAACTTGCTCATGGCCATGCTCCATTTTCTAAGTATCCACCAATGAAGGTTTTGCTGATGACCTTACAAAATGCACCTCCAGGTCTTGACTATGAAAGAGACAAAAAATTTTCAAAGTCATTCAAAGAGATGGTAGCCACCTGCTTAGTGAAGGATCCAAAGAAACGTCCGACTTCAGAGAAGCTTTTTAAGCACAGTTTCTTTAAACATGCACGTTCAAATGAATATTTAGCTCGTACCATTCTTGAGGGCCTTACTCCACTAGGTGATCGTTTTAGGACACTGAAGGCAAAAGAAGCTGATCTTCTTGTACAGAACAAGGCTTTGTATGGGGACAAAGAGCAATTATCACAGCAAGAATACATACGAGGAATCAGTGCCTGGAATTTTAATCTGGAGGATTTGAAAAATCAGGCTGCCCTTATTCAGGATTATGATGTCATTTCAAATGTAGATGATCCAGATTGTTCAAATGCTGCACCGAGTCATGAGGATGGGCTTAATGATCTATCTAATTTGGAGAATTCGCTCGCTTCATTTCCCATTCAACCTCTTCAAGCACTTAAAGGTTATTTTGATGTTTGTGAGGATGATGGGAATGCTAGTAGTTTGAGTTGGAGAGATGTAATGCAGTCAGAATCTGAACAACAATCAGTGGATCAAGAAGCTGAAAAGGATGATGGTGAGAATTTCGGGCGGAGTAGCTCTTTACCACGCCAAATCATTCCTGGGCATAAAAAATTTTTTAGCGGTTCACTGCTACAGGATAATGCTCTCTCTCCTAAAAAAGTTAATGGTGATGGGGACAGGGAAAATATACAATCAAGATATCAACCCGAGCGGAACTATAGTGGTCCATTATTACATCGTCAAAAAAGAGATACAAATAACATTTCATCTGTGGAGGATACACCAGAGGGAGCAGTTGTGCAATGCAAGGGCCGTTTTAAAGTCACTTCAGCAGAGCTCAGTCCCAAGGGTCCTACAAATTGCTTCTTCAGCCAAGTTTCTGGAGGTTCAACAAGTCCAACAACACCGAGCCTTACAGCTGCCTCAATTCTTCCATCACTGCAATTTGTTTTGCAGCAGAACACCATGCAAAGGGAAGGAATAATGAAATTGATCAAATATGTGGAGCAGTCCTGTGGTAATGCCTCTCATCCTTTGATCGTTTGCATTTAA 1803 40.99 MEHEKKFPLDAKDYKLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLQAHCSFTSGHTLWVVMPYMAGGSCLHIMKSEYPEGFDEPVIATLLREVLKALVYLHNHGHIHRDVKAGNILIDSNGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSKSFKEMVATCLVKDPKKRPTSEKLFKHSFFKHARSNEYLARTILEGLTPLGDRFRTLKAKEADLLVQNKALYGDKEQLSQQEYIRGISAWNFNLEDLKNQAALIQDYDVISNVDDPDCSNAAPSHEDGLNDLSNLENSLASFPIQPLQALKGYFDVCEDDGNASSLSWRDVMQSESEQQSVDQEAEKDDGENFGRSSSLPRQIIPGHKKFFSGSLLQDNALSPKKVNGDGDRENIQSRYQPERNYSGPLLHRQKRDTNNISSVEDTPEGAVVQCKGRFKVTSAELSPKGPTNCFFSQVSGGSTSPTTPSLTAASILPSLQFVLQQNTMQREGIMKLIKYVEQSCGNASHPLIVCI* 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27646938 27657107 - Vvi14g1350 Vvi14g1350 776417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1350 600 MobiDBLite consensus disorder prediction 466 494 - -
Vvi14g1350 600 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Vvi14g1350 600 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 588 - -
Vvi14g1350 600 Pfam Protein kinase domain 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1350 600 CDD STKc_OSR1_SPAK 12 275 - -
Vvi14g1350 600 ProSiteProfiles Protein kinase domain profile. 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1350 600 Gene3D Transferase(Phosphotransferase) domain 1 95 311 - -
Vvi14g1350 600 Gene3D Phosphorylase Kinase; domain 1 3 90 - -
Vvi14g1350 600 MobiDBLite consensus disorder prediction 415 446 - -
Vvi14g1350 600 SMART serkin_6 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1350 600 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 588 - -
Vvi14g1350 600 MobiDBLite consensus disorder prediction 425 439 - -
Vvi14g1350 600 SUPERFAMILY Protein kinase-like (PK-like) 12 303 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g702 Vvi14g1350 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76200 PF00069 Pkinase 7.10E-59 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1350 K08835 - vvi:100264532 1170.61