Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1351 ATGGTGGGTGGGAGGGGGAGAGGGATACGTTTTAGCAAACTCTATACTTTTTCGTGTGTTCGATCTTCGTTTAGGGAAGATCGTTCACAAATTGGGCAGAAAGGGTACACGAGAGTAGTGTATTGCAACGATCCTGATAATCCAGAAGCGGTTCAGCTAAATTATAGGGGGAATTATGTATCCACTACCAAGTATACTGCAGTGAATTTTTTACCGAAGTCTTTGTTTGAGCAATTTAGGAGGGTTGCGAATATATATTTTCTTGTTGTGGCTTGTGTTTCGTTTAGTCCACTGGCTCCTTACTCCGCCCTTAGTGTTCTTGCACCGTTGTTGGTGGTTATTGGAGCTACCATGGCCAAGGAAGCTGTTGAAGATTGGAGGCGAAGAAAACAGGATATAGAAGCCAACAATCGGAGGGTCCAAGTGTATAGGAATAATAGTTTCTGCAAGGCCAAATGGAAGGATCTCAGAGTTGGTGACATTGTTAAGGTTGACAAGGATGAATTTTTTCCTGCTGATTTGTTTCTACTTTCATCAAGCTATGAGGATGGGTTTTGTTATGTTGAGACAATGAACCTTGATGGAGAGACTAATCTGAAACTTAAACATGCTTTGGAGGAGACATCTTCTCTCCGTGATGAAAAATCATTTCAGCAATTTAAGGCAGTCATCAAGTGTGAGGACCCAAATGAAGATCTTTATTCCTTTCTTAGAAATACTGATTGCATTTATGATGATACAACTGTGTTTTATGACCCCCAAAGACCAGTACTAGCTGCATTTCTTCATTTCTTGACAGGGCTTATGTTGTATGGATATTTGATACCAATATCATTGTATGTCTCCATTGAGATTGTGAAAGTTTTACAGAGTATTTTCATTAACCAGGATCAGGATATGTATTATGAGGAAACAGACAAACCAGCACATGCACGCACGTCTAATTTGAATGAGGAACTTGGTCAAATTGATACAATACTGTCTGACAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTAAAATGTTCAATAGCAGGCACTGCTTATGGACGTGGTATGACAGAAGTGGAAAGGGCATTGGCGAGGAGAAATGATAGGCCACATGAAGTGGATGTTATACAAAGGTTCTTTCGAGTATTGGCAATTTGCCATACGGCCATTCCAGATATAAATGAAGGTGAAATTTCTTATGAAGCCGAGTCACCAGATGAAGCAGCCTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTTCAAGGAAACAAACGTGCATCTCATTGCATGAGTTAGATCATAAGAGTGGCGGAGAGGTTGACAGAACATACAAGCTTCTTCATGTCTTAGAATTCAAGAGTTCTCGTAAAAGAATGTCTGTGATTGTAAGGAATCCAGAGAATCAGTTGTTGCTCCTTTCCAAGGGCGCAGACAGTGTAATGTTTGACAGACTCTCCAAGGAGGGGCGAATGTTTGAGGCTCAGACCCGGGATCACATCAGAAAATATGCTGAGGCAGGGTTACGTACTTTGGTACTTGCGTACCGTGATCTTGATGAAGAAGAGTATGAGGCATGGGAAGAGGAGTTTTCAAGGGCCAAAACTTCTGTTGGTGCAGATCATGATGCTTTGGTGGATGCTGCTTGTGATAAAATTGAGAGGGATTTAATTCTTCTTGGTGCTACAGCTGTTGAAGACAAGCTGCAAAAAGGGGTTCCTGAGTGCATTGACAGGCTTGCACAGGCTGGTATTAAAATCTGGGTCTTAACTGGTGATAAAATGGAAACTGCAATTAATATTGGGTATGCATGTAGTTTACTGAGACAAGGGATGAAGCAAATAGTGATTACACTAGATTCACAAGATATCGATGTTTTGCGGAAACAGGGGGACAAGGAGGCCATTGCAAAGGCTTCTTGTGAAAGCATAAGGAAGCAAATTAGAGAAGGAAAATCTCAACTTACTTCAGCTAAAGAAAATTCTGTCTCATTTGCTCTGATAATTGATGGTGAATCTCTGAGTTTTGCTCTCAACAAGAATCTTGAGAAGTCATTTTTGGAACTTGCAATAGATTGTGCTTCCGTTATTTGCTGTCGCTCTTCTCCCAAACAGAAAGCTCTTGTTACAAGATTGGTCAAAATGGGGACAGGCGAAACAACTCTAGCAATAGGTGATGGGGCAAATGATGTTGGCATGCTTCAAGAGGCTGATATTGGAGTTGGCATTAGTGGTGTCGAAGGCATGCAGGCTGTGATGTCCAGTGATTTTGCAATAGCTCAATTCCGTTTTCTGGAACGTTTGTTGCTGGTTCATGGCCATTGGTGTTACAGGCGAATATCAATGATGATATGCTACTTCTTCTACAAGAACATTGCTTTTGGGTTTACCCTATTTTGGTTTGAGGCTTATGCTTCTTTCTCTGGTCAACCTGCTTATAATGATTGGTACATGTCCTTCTACAATGTCTTCTTCACTTCACTTCCTGTGATTGCTCTTGGTGTTTTCGATCAGGATGTTTCCGCACGCCTTTGCCTCAAGTACCCTTTATTATATCAGGAAGGAGTACAGAACATTCTCTTCAGCTGGCCCCGAATACTTGGGTGGATGTCTAATGGGGTTATAAGCTCTATAATTATCTTCTTCTTCACCACCAAGTCCATCATTCCCCAATGTGGGCAGTGA 2685 41.34 MVGGRGRGIRFSKLYTFSCVRSSFREDRSQIGQKGYTRVVYCNDPDNPEAVQLNYRGNYVSTTKYTAVNFLPKSLFEQFRRVANIYFLVVACVSFSPLAPYSALSVLAPLLVVIGATMAKEAVEDWRRRKQDIEANNRRVQVYRNNSFCKAKWKDLRVGDIVKVDKDEFFPADLFLLSSSYEDGFCYVETMNLDGETNLKLKHALEETSSLRDEKSFQQFKAVIKCEDPNEDLYSFLRNTDCIYDDTTVFYDPQRPVLAAFLHFLTGLMLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDKPAHARTSNLNEELGQIDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVERALARRNDRPHEVDVIQRFFRVLAICHTAIPDINEGEISYEAESPDEAAFVIAARELGFEFFSRKQTCISLHELDHKSGGEVDRTYKLLHVLEFKSSRKRMSVIVRNPENQLLLLSKGADSVMFDRLSKEGRMFEAQTRDHIRKYAEAGLRTLVLAYRDLDEEEYEAWEEEFSRAKTSVGADHDALVDAACDKIERDLILLGATAVEDKLQKGVPECIDRLAQAGIKIWVLTGDKMETAINIGYACSLLRQGMKQIVITLDSQDIDVLRKQGDKEAIAKASCESIRKQIREGKSQLTSAKENSVSFALIIDGESLSFALNKNLEKSFLELAIDCASVICCRSSPKQKALVTRLVKMGTGETTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEGVQNILFSWPRILGWMSNGVISSIIIFFFTTKSIIPQCGQ* 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27671064 27684285 + Vvi14g1351 Vvi14g1351 776418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1351 894 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 106 351 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi14g1351 894 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 695 806 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi14g1351 894 Pfam Phospholipid-translocating ATPase N-terminal 40 104 IPR032631 -
Vvi14g1351 894 Gene3D - 404 534 IPR023299 GO:0000166
Vvi14g1351 894 SFLD p-type atpase 309 775 IPR044492 -
Vvi14g1351 894 ProSitePatterns E1-E2 ATPases phosphorylation site. 329 335 IPR018303 -
Vvi14g1351 894 Coils Coil 641 661 - -
Vvi14g1351 894 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 333 573 IPR023299 GO:0000166
Vvi14g1351 894 Pfam Phospholipid-translocating P-type ATPase C-terminal 752 885 IPR032630 -
Vvi14g1351 894 PRINTS P-type cation-transporting ATPase superfamily signature 327 341 - -
Vvi14g1351 894 PRINTS P-type cation-transporting ATPase superfamily signature 610 620 - -
Vvi14g1351 894 PRINTS P-type cation-transporting ATPase superfamily signature 724 743 - -
Vvi14g1351 894 Pfam Cation transport ATPase (P-type) 393 487 - -
Vvi14g1351 894 Gene3D - 556 764 IPR023214 -
Vvi14g1351 894 Gene3D - 114 251 - -
Vvi14g1351 894 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 368 888 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Vvi14g1351 894 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 885 IPR023298 -
Vvi14g1351 894 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 247 891 - -
Vvi14g1351 894 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 240 - -
Vvi14g1351 894 SUPERFAMILY Calcium ATPase, transduction domain A 137 248 IPR008250 -
Vvi14g1351 894 Coils Coil 116 136 - -
Vvi14g1351 894 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 5 240 - -
Vvi14g1351 894 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 247 891 - -
Vvi14g1351 894 SFLD C1.7: P-type atpase like 309 775 - -
Vvi14g1351 894 SUPERFAMILY HAD-like 322 779 IPR036412 -
Vvi14g1351 894 CDD P-type_ATPase_APLT_Dnf-like 57 884 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1351 K01530 - vvi:100259356 1247.26