Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1363 ATGAGGACCTCGTATCACTCGGTTCATGAGCCAACCTGTGGAATTTGTAAGAAACACTGCAGATCTTTTGAATCTCTCAGGGAGCATCTCATAGGGCCGTTGCCAAAAGTGGAATGCGCAAGAATATTCAGTGTCCGCGGATGCAACCTCTGCTTAGATATCCTTGGCAGCCCTAATGCACTTAGGGCTCATCGAGGGACATGCCAACTTTCACGCGGAAACACCGGAGCGCTGCTTTCTCGCATGGCTAACCTAGGTATTCAGGATGACCTGAATAGCAGAACAAGAGGCTCAAAGGTGGTTGCACTGGGCTGCAAAATGGTAGGGGGTGGAACCGATGGCTCGCTGGATCTTTGCGCAAGGGTTTGCCTCATCGATGAATATGAAAACATCATCTTTCATACTTATGTCAAGCCCCAAATTCCAGTCACAAACTACAGGTATGAAACCACAGGGACAAGGCCCGAATTCTTGAGGGATGCAATGCCAGTGAAGCAAGTCCAAAGAAAAATCCAAGACTTCCTTTGCAATGGAGAGCCCATATGGAAGATTCGTTCTAGAGGTGGAAAAGCTAGGATTCTCGTGGGTCATGGTTTGGATCATGACCTGGACTGTCTACAAATGGAGTACCCAACGCTAATGATCAGGGACACAGCTAAGTATCCTCCATTGATGAAAACAAGCAAGCTCAGCAACTCACTGAAGTATCTGACACAAGCATACCTCGGGTATGACATCCAAACTGGCATACAAGATCCTTATGAGGATTGTGTTGCAACAATGAGGCTTTACATGAGAATGAGATCCCAAAGTCATAAAATAGAGGACTACCCGCTCGCGTCTGACCCGCAGAACCGAAACAACTTTGCATCAGGGAGGCAAAGTGAGCTAGAGAGGATGACCCCAGATGAAATGTTGGAAATCTCCAGGTCTGATTACTATTGTTGGTGCCTGGACACGAAGGAAGGCTCCTGA 975 47.49 MRTSYHSVHEPTCGICKKHCRSFESLREHLIGPLPKVECARIFSVRGCNLCLDILGSPNALRAHRGTCQLSRGNTGALLSRMANLGIQDDLNSRTRGSKVVALGCKMVGGGTDGSLDLCARVCLIDEYENIIFHTYVKPQIPVTNYRYETTGTRPEFLRDAMPVKQVQRKIQDFLCNGEPIWKIRSRGGKARILVGHGLDHDLDCLQMEYPTLMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDPYEDCVATMRLYMRMRSQSHKIEDYPLASDPQNRNNFASGRQSELERMTPDEMLEISRSDYYCWCLDTKEGS* 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27753737 27755451 + Vvi14g1363 Vvi14g1363 776430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1363 324 Pfam Exonuclease 117 263 IPR013520 -
Vvi14g1363 324 MobiDBLite consensus disorder prediction 277 296 - -
Vvi14g1363 324 PANTHER OS02G0709000 PROTEIN 1 319 - -
Vvi14g1363 324 MobiDBLite consensus disorder prediction 281 295 - -
Vvi14g1363 324 CDD REX4_like 101 264 IPR037431 GO:0006364|GO:0008408
Vvi14g1363 324 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 319 - -
Vvi14g1363 324 SMART exoiiiendus 99 273 IPR013520 -
Vvi14g1363 324 Gene3D - 96 282 IPR036397 GO:0003676
Vvi14g1363 324 SUPERFAMILY Ribonuclease H-like 101 270 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1363 - - vvi:100249235 675.626