Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g137 ATGAGTGAGACTGAAGTTTCGAGGATGAAGTCTTCTCTGGTTCCGCTGGCAACCTTGATTGGTCGCGAGCTTAGGAACGAGAAGGTCGAGAAACCTTATATTAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGGGAGGATTATTTTCTGATCAAAACCGATTGCCAGAGGGTTCCTGGGAATCCGTCGACTTCGTTTTCAGTCTTTGCGATTTTTGATGGGCATAATGGTATATCTGCTGCTATCTTTGCAAAGGAGAATTTATTGAATAATGTTTTGAGTGCAATTCCTCAAGGCATTGGTCGGGAAGGTTGGCTTCAAGCCCTTCCTCGGGCTCTGGTTGCCGGATTTGTGAAAACTGATATAGAATTTCAGCAGAAAGGTGAAACTTCTGGCACGACAGTGACATTTGTTGTGATTGACGGGTGGACGGTGACTGTTGCATCTGTAGGGGATTCTCGATGCATATTGGACACACAGGGTGGTGTGGTTTCTTTGTTAACAGTTGATCACAGGCTGGAAGAGAATGCAGAAGAAAGGGAACGTGTCACTGCAAGTGGGGGTGAAGTTGGAAGGCTGAATGTTTTTGGGGGCAATGAGGTTGGCCCACTCCGCTGCTGGCCTGGTGGATTATGTCTCTCCAGGTCAATTGGTGACACAGATGTGGGAGAATTCATTGTCCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGGGGACGGCTTATTATTGCTTCTGATGGAATCTGGGATGCTTTATCATCTGACATGGCTGCTAAGTCTTGTCGGGGTTTGCCTGCAGAGCTTGCTGCAAAGCTGGTTGTTAAGGAAGCTTTAAGGTCAAGGGGCTTGAAGGATGATACAACATGCCTAGTTGTTGATATGATTCCATCAGATAATCCTGTCTTACCTCCAACACCAAAGAAGAAACAAAACATGCTCAGTTCATTTATCTTTGGGAAGAGATCTCAGAATTTTATGAACAAATCAACAAATAAGCTTTCTGCAGTCGGGGTTGTGGAGGAGTTGTTTGAAGAGGGTTCTGCAATGCTTGCGGAAAGGTTGGGTAAAGATATTCCTTCAAACACCAACTCTGGGCTTTTCAGATGTGCAGTCTGCCAAGTGGATCAAGATCAGTCACCAAGCGATGGTTTATCAGTGAACTCTGGACCGTTCTTCTCACCTGCATCCAAGCCATGGGAAGGTCCCTTCCTCTGTGCAAACTGTCGGAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAAGCAGACCTACAATCACCGCATAA 1293 45.78 MSETEVSRMKSSLVPLATLIGRELRNEKVEKPYIKYGQAALAKKGEDYFLIKTDCQRVPGNPSTSFSVFAIFDGHNGISAAIFAKENLLNNVLSAIPQGIGREGWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDMIPSDNPVLPPTPKKKQNMLSSFIFGKRSQNFMNKSTNKLSAVGVVEELFEEGSAMLAERLGKDIPSNTNSGLFRCAVCQVDQDQSPSDGLSVNSGPFFSPASKPWEGPFLCANCRKKKDAMEGKRPSRPTITA* 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1282303 1289551 + Vvi14g137 Vvi14g137 775204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g137 430 SMART PP2C_SIG_2 51 297 IPR001932 -
Vvi14g137 430 PANTHER ALPHABET, ISOFORM E-RELATED 2 429 - -
Vvi14g137 430 CDD PP2Cc 43 296 IPR001932 -
Vvi14g137 430 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Vvi14g137 430 Gene3D - 38 302 IPR036457 -
Vvi14g137 430 SMART PP2C_4 23 295 IPR001932 -
Vvi14g137 430 Pfam Protein phosphatase 2C 61 280 IPR001932 -
Vvi14g137 430 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 429 - -
Vvi14g137 430 SUPERFAMILY PP2C-like 43 296 IPR036457 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g137 - - vvi:100249319 858.596