Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1373 ATGAAGGAGAAGAGTGACGGGTTTGTGAGGGCAGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTCAGCAGAGCATGGACTATGGAGCAGAAGAAGGAGCAGCAGGAAGAGAGGCCCAATACTCGAGAAGAGTGGGAGATTGATCCTTCCAAGCTCGTCATCAAGAGTGTCATCGCTCGTGGCACTTTTGGGACGGTTCATCGTGGGGTTTACGATGGCCAAGATGTTGCAGTTAAACTTCTTGATTGGGGAGAGGAGGGCCACAGAACAGAGGCTGAAATAGCTTCACTTAGAGCAGCTTTTACACAAGAAGTTGTTGTATGGCACAAGCTTGATCATCCTAATGTAACTAAGTTCATTGGGGCTACAATTGGCTCATCAGAGCTAAACATACAAACAGAAAATGGTCACATTGGCATGCCAAGTACTGTATGTTGTGTTGTTGTTGAATATCTTCCTGGGGGAGCACTGAAATCTTACCTCATAAAGAACCATAGAAGGAAGCTGGCTTTCAAAGTAGTTGTCCAACTGGCACTAGATCTTGCACGAGGGTTGAGCTATCTTCATTCTAAGAAGATTGTCCACAGAGATGTGAAAACAGAGAACATGCTTCTGGACAAGACTCGTACTTTAAAAATTGCTGACTTTGGGGTTGCTCGCATGGAGGCTTCAAATCCTAATGACATGACAGGCGAGACTGGAACCCTTGGTTACATGGCACCAGAGGTTCTCAATGGCAACCCGTATAATAGGAAATGCGATGTGTACAGTTTTGGTATCTGCTTGTGGGAAATTTATTGCTGTGACATGCCATATCCAGATCTCAGCTTCTCAGAAGTGACCTCAGCTGTTGTCCGCCAGAATCTGAGGCCTGAGATACCTCGTTGTTGCCCGAGCTCTCTTGCGAATGTAATGAAGCGATGCTGGGATGCTAACCCTGACAAGCGCCCAGAGATGGACGAGGTGGTATCGATGCTGGAGGGCATTGACACATCCAAGGGTGGAGGTATGATCCCTCTAGATCAACCTCAAGGCTGTTTCTGTTTTGGCAAGTACCGAGGGCCTTGA 1083 47.09 MKEKSDGFVRADQIDLKSLDEQLQRHLSRAWTMEQKKEQQEERPNTREEWEIDPSKLVIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRTEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSELNIQTENGHIGMPSTVCCVVVEYLPGGALKSYLIKNHRRKLAFKVVVQLALDLARGLSYLHSKKIVHRDVKTENMLLDKTRTLKIADFGVARMEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEGIDTSKGGGMIPLDQPQGCFCFGKYRGP* 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 27812666 27819608 + Vvi14g1373 Vvi14g1373 776440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1373 360 CDD STKc_MAP3K-like 63 331 - -
Vvi14g1373 360 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672|GO:0006468
Vvi14g1373 360 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672|GO:0006468
Vvi14g1373 360 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Vvi14g1373 360 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Vvi14g1373 360 SUPERFAMILY Protein kinase-like (PK-like) 26 331 IPR011009 -
Vvi14g1373 360 Pfam Protein tyrosine and serine/threonine kinase 58 331 IPR001245 GO:0004672|GO:0006468
Vvi14g1373 360 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 2 354 - -
Vvi14g1373 360 Gene3D Phosphorylase Kinase; domain 1 46 140 - -
Vvi14g1373 360 MobiDBLite consensus disorder prediction 30 49 - -
Vvi14g1373 360 PIRSF ILK 8 340 - -
Vvi14g1373 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Vvi14g1373 360 ProSiteProfiles Protein kinase domain profile. 57 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1373 360 Gene3D Transferase(Phosphotransferase) domain 1 157 342 - -
Vvi14g1373 360 SMART serkin_6 57 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1373 360 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 354 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1373 Vvi17g728 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76201 PF07714 PK_Tyr_Ser-Thr 4.50E-63 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1373 - - vvi:100268039 743.806